RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 VPS37BQ9H9H4 285 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 KCND1Q9NSA2 647 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 PIH1D1Q9NWS0 290 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 FAM8A1Q9UBU6 413 aa9.76□□□□□ -0.85
CLSTN3-203ENST00000534830 APCP25054 2843 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 SLC5A10A0PJK1 596 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 OR51F1A6NGY5 319 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 H3BMH7 237 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 LIN7AO14910 233 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 CPNE3O75131 537 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 TPBGLP0DKB5 382 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 ST6GAL1P15907 406 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 MSNP26038 577 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 VARSP26640 1264 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 PTPN4P29074 926 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 RORAP35398 523 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 GRIA1P42261 906 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 PREPP48147 710 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 ARCN1P48444 511 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 CDH17Q12864 832 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 ABRQ12979 859 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 CHAF1BQ13112 559 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 PRKAA1Q13131 559 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 GPS2Q13227 327 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 SIX1Q15475 284 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 GPR19Q15760 415 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 PLEKHS1Q5SXH7 462 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 MEI1Q5TIA1 1274 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 PRAMEF17Q5VTA0 474 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 IZUMO3Q5VZ72 239 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 LCN10Q6JVE6 187 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 ARMC6Q6NXE6 501 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 FAM199XQ6PEV8 388 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 ZNF662Q6ZS27 426 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 TAS2R42Q7RTR8 314 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 DSELQ8IZU8 1212 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 SPC24Q8NBT2 197 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 PHC3Q8NDX5 983 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 OR52E1Q8NGJ3 308 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 LCN9Q8WX39 176 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 TFGQ92734 400 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 SRMSQ9H3Y6 488 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 SYTL2Q9HCH5 934 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 PCM1Q15154 2024 aa9.75□□□□□ -0.85
CLSTN3-203ENST00000534830 AKAP9Q99996 3911 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 HEATR9A2RTY3 570 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 CCDC162PA2VCL2 907 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 SLC9B1P1A6NJY1 282 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 BHMG1C9JSJ3 638 aaPredicted RBP9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 QSOX1O00391 747 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 IFRD1O00458 451 aaPredicted RBP9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 KRT86O43790 486 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 SCRG1O75711 98 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 CAPN1P07384 714 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ETS1P14921 441 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 CDH3P22223 829 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ARL4DP49703 201 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 CCL11P51671 97 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 KRT33BQ14525 404 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 UGT8Q16880 541 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 CCDC38Q502W7 563 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 TMTC4Q5T4D3 741 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 TSTD2Q5T7W7 516 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 SEL1L2Q5TEA6 688 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 LYPLAL1Q5VWZ2 237 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 CPZQ66K79 652 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 JMJD6Q6NYC1 403 aaPredicted RBP9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 DRICH1Q6PGQ1 229 aaPredicted RBP9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ZNF534Q76KX8 674 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 AMIGO1Q86WK6 493 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 MCEMP1Q8IX19 187 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 TBC1D21Q8IYX1 336 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 Q8NA96 180 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 GLIS1Q8NBF1 620 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 FLVCR1-AS1Q8TAF5 88 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ADAMTS17Q8TE56 1095 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 C1orf54Q8WWF1 131 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 PEX13Q92968 403 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 HDAC10Q969S8 669 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 C19orf60Q96EN9 201 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ZNF778Q96MU6 729 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 TRAPPC9Q96Q05 1148 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 TSGA10Q9BZW7 698 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 CHRNA10Q9GZZ6 450 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ACTL8Q9H568 366 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ACSS2Q9NR19 701 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ACTR10Q9NZ32 417 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 SMARCAL1Q9NZC9 954 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 SLC2A6Q9UGQ3 507 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ITGB1BP2Q9UKP3 347 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 ICKQ9UPZ9 632 aa9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 FARSAQ9Y285 508 aaKnown RBP9.74□□□□□ -0.85
CLSTN3-203ENST00000534830 CSMD2Q7Z408 3487 aa9.73□□□□□ -0.85
CLSTN3-203ENST00000534830 PCSK5Q92824 1860 aa9.73□□□□□ -0.85
CLSTN3-203ENST00000534830 SVILO95425 2214 aa9.73□□□□□ -0.85
CLSTN3-203ENST00000534830 CCDC78A2IDD5 438 aa9.73□□□□□ -0.85
CLSTN3-203ENST00000534830 C2orf74A8MZ97 194 aa9.73□□□□□ -0.85
CLSTN3-203ENST00000534830 OR1I1O60431 355 aa9.73□□□□□ -0.85
CLSTN3-203ENST00000534830 GOT2P00505 430 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-203ENST00000534830 FTH1P02794 183 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms