RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 FAM92AA1XBS5 289 aa16.92■□□□□ 0.3
PHRF1-206ENST00000534320 FAM234BA2RU67 622 aa16.92■□□□□ 0.3
PHRF1-206ENST00000534320 SAGE2PA6NJ88 616 aa16.92■□□□□ 0.3
PHRF1-206ENST00000534320 ZBTB42B2RXF5 422 aa16.92■□□□□ 0.3
PHRF1-206ENST00000534320 CDC7O00311 574 aa16.92■□□□□ 0.3
PHRF1-206ENST00000534320 CDC40O60508 579 aaKnown RBP eCLIP16.92■□□□□ 0.3
PHRF1-206ENST00000534320 CLDN7O95471 211 aa16.92■□□□□ 0.3
PHRF1-206ENST00000534320 ALDOAP04075 364 aaKnown RBP16.92■□□□□ 0.3
PHRF1-206ENST00000534320 RPS14P62263 151 aaKnown RBP16.92■□□□□ 0.3
PHRF1-206ENST00000534320 SF1Q15637 639 aaKnown RBP16.92■□□□□ 0.3
PHRF1-206ENST00000534320 MARCH8Q5T0T0 291 aa16.92■□□□□ 0.3
PHRF1-206ENST00000534320 UTS2BQ765I0 119 aa16.92■□□□□ 0.3
PHRF1-206ENST00000534320 CENPNQ96H22 339 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-206ENST00000534320 CCNB1IP1Q9NPC3 277 aa16.92■□□□□ 0.3
PHRF1-206ENST00000534320 H3BNX3 289 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 MT-ND1P03886 318 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 DLDP09622 509 aaKnown RBP16.91■□□□□ 0.3
PHRF1-206ENST00000534320 ATF6P18850 670 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 LSM3P62310 102 aaKnown RBP16.91■□□□□ 0.3
PHRF1-206ENST00000534320 ARSIQ5FYB1 569 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 PLET1Q6UQ28 207 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 EBPLQ9BY08 206 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 SOHLH2Q9NX45 425 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 RAB23Q9ULC3 237 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 ZNF780BQ9Y6R6 833 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 SLX4Q8IY92 1834 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 SLC28A2O43868 658 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 FGF3P11487 239 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-206ENST00000534320 DDX6P26196 483 aaKnown RBP eCLIP16.91■□□□□ 0.31e-7■■□□□ 11.7
PHRF1-206ENST00000534320 RFC2P35250 354 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 PTPRCAPQ14761 206 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 ZNHIT3Q15649 155 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-206ENST00000534320 NEK5Q6P3R8 708 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-206ENST00000534320 ANKRD46Q86W74 232 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 RAB43Q86YS6 212 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 HIPK1Q86Z02 1210 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 PDPRQ8NCN5 879 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 PHC3Q8NDX5 983 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 IGSF8Q969P0 613 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 PCDHGA11Q9Y5H2 935 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 MAFKO60675 156 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 SCELO95171 688 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 GJB5O95377 273 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 CCNFP41002 786 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 PNLIPRP1P54315 467 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 MYLK3Q32MK0 819 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 MRPL10Q7Z7H8 261 aaKnown RBP16.91■□□□□ 0.3
PHRF1-206ENST00000534320 EEF1AKMT1Q8WVE0 214 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 RTP4Q96DX8 246 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 MRGPRX2Q96LB1 330 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 TRIT1Q9H3H1 467 aaKnown RBP16.91■□□□□ 0.3
PHRF1-206ENST00000534320 CLN6Q9NWW5 311 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 FLRT1Q9NZU1 646 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 NOS1APO75052 506 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-206ENST00000534320 NCK1P16333 377 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 GNAZP19086 355 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 CYS1Q717R9 158 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 GALNT13Q8IUC8 556 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 CBR4Q8N4T8 237 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 OR10A6Q8NH74 314 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 BTBD9Q96Q07 612 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 DERL2Q9GZP9 239 aa16.91■□□□□ 0.3
PHRF1-206ENST00000534320 INPPL1O15357 1258 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 OR10H3O60404 316 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 CYP11A1P05108 521 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 Q6ZVU0 165 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 MCFD2Q8NI22 146 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 NAT14Q8WUY8 206 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 SP140LQ9H930 580 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 C12orf4Q9NQ89 552 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 NLE1Q9NVX2 485 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-206ENST00000534320 GALPQ9UBC7 116 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 A0A0G2JPF8 293 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 HNRNPCL3B7ZW38 293 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 WNT9AO14904 365 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 LYNP07948 512 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 HNRNPCL4P0DMR1 293 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 CYP4B1P13584 511 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 HSF2Q03933 536 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 PIK3R6Q5UE93 754 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 BRAT1Q6PJG6 821 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 FAM43BQ6ZT52 329 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-206ENST00000534320 KAT6AQ92794 2004 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 PAPPAQ13219 1627 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 LCHNA4D1U4 455 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 FGF18O76093 207 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 FESP07332 822 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 GSTM5P46439 218 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 ERVK-21P61565 698 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 CDHR3Q6ZTQ4 885 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 FRMD7Q6ZUT3 714 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 CYP2U1Q7Z449 544 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 TMEM135Q86UB9 458 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 PHTF2Q8N3S3 785 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 MCMBPQ9BTE3 642 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 OR2AG1Q9H205 316 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 TDP1Q9NUW8 608 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 IL36AQ9UHA7 158 aa16.9■□□□□ 0.3
PHRF1-206ENST00000534320 COL22A1Q8NFW1 1626 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms