RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 HOXC6P09630 235 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 TPBGLP0DKB5 382 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 PRR23D2P0DMB1 279 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 KRT5P13647 590 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ARRB2P32121 409 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 PPM1AP35813 382 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ATP6V1E1P36543 226 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 RAD23BP54727 409 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 RAB14P61106 215 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 STX1BP61266 288 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 KDSRQ06136 332 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 LGALS3BPQ08380 585 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ITPK1Q13572 414 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 RCN2Q14257 317 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 SPARCL1Q14515 664 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 TMEM266Q2M3C6 531 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 GRAMD1BQ3KR37 738 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 FAM76BQ5HYJ3 339 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 KCNT1Q5JUK3 1230 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 TCHHL1Q5QJ38 904 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ASPHD1Q5U4P2 390 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 AADACL4Q5VUY2 407 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 PGBD2Q6P3X8 592 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 CFAP161Q6P656 301 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 C1orf228Q6PIY5 440 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 SMIM5Q71RC9 77 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 PEX26Q7Z412 305 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 HDDC2Q7Z4H3 204 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 MDGA2Q7Z553 956 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ANKS1BQ7Z6G8 1248 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 TBC1D1Q86TI0 1168 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 CDR2LQ86X02 465 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 TICAM1Q8IUC6 712 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ERI1Q8IV48 349 aaKnown RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 MB21D2Q8IYB1 491 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 DIS3L2Q8IYB7 885 aaKnown RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 OR8H2Q8N162 312 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ARHGAP24Q8N264 748 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 LIX1Q8N485 282 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 SLC25A41Q8N5S1 370 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 SMRP1Q8NCR6 262 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 OR52K1Q8NGK4 314 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 GRPEL2Q8TAA5 225 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 FANK1Q8TC84 345 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 GIPC3Q8TF64 312 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 HMGB4Q8WW32 186 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 PIGBQ92521 554 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 MRPS27Q92552 414 aaKnown RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 INPP5DQ92835 1189 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 BORCS5Q969J3 196 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 HDAC11Q96DB2 347 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 SLC47A1Q96FL8 570 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 CHMP6Q96FZ7 201 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 RMND5BQ96G75 393 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF479Q96JC4 524 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ZSCAN31Q96LW9 406 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 FAM20AQ96MK3 541 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 CAMK1GQ96NX5 476 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 C9orf16Q9BUW7 83 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 MTMR12Q9C0I1 747 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ANKRD2Q9GZV1 360 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF700Q9H0M5 742 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 DDX47Q9H0S4 455 aaKnown RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 LMAN2LQ9H0V9 348 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 LRRC19Q9H756 370 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 ELAC1Q9H777 363 aaKnown RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 MARCH7Q9H992 704 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 PNRC2Q9NPJ4 139 aaKnown RBP4.21□□□□□ -1.74
ITGB1-219ENST00000534049 TXLNGQ9NUQ3 528 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.21□□□□□ -1.747e-9■□□□□ 9.6
ITGB1-219ENST00000534049 IL37Q9NZH6 218 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 IGSF9Q9P2J2 1179 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 DNAJB4Q9UDY4 337 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 MALT1Q9UDY8 824 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 CNTN6Q9UQ52 1028 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 LRP12Q9Y561 859 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 SCN7AQ01118 1682 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 UBR2Q8IWV8 1755 aa4.21□□□□□ -1.74
ITGB1-219ENST00000534049 BRCA1P38398 1863 aaKnown RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 CXorf65A6NEN9 183 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 OR5K3A6NET4 321 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 EFCAB10A6NFE3 127 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 TSPY2A6NKD2 308 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 EVPLLA8MZ36 301 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 M0QYT0 321 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 SLC9A3R1O14745 358 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ZBTB43O43298 467 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 DNPH1O43598 174 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 SCO2O43819 266 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 NIPSNAP2O75323 286 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 PALMO75781 387 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 PLEKHA8P1O95397 391 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 GAS8O95995 478 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 CHRNA1P02708 482 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 IFNA16P05015 189 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 LYNP07948 512 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 FAM228BP0C875 321 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 OCM2P0CE71 109 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 OCMP0CE72 109 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 TSPY3P0CV98 308 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms