RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 GSDMCQ9BYG8 508 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 ATG10Q9H0Y0 220 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 C12orf65Q9H3J6 166 aaKnown RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 HIPK3Q9H422 1215 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 DPEP3Q9H4B8 488 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 USP29Q9HBJ7 922 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 ITM2CQ9NQX7 267 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 PTBP2Q9UKA9 531 aaKnown RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 CNOT6Q9ULM6 557 aaKnown RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 NR2E1Q9Y466 385 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 ASB3Q9Y575 518 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 PCDHGB1Q9Y5G3 927 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 DUXAA6NLW8 204 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF487B1APH4 448 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 PDPK1O15530 556 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 PRODHO43272 600 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 AGR2O95994 175 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 NPPAP01160 153 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 AOC1P19801 751 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 HOXD12P35452 270 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 CRISP3P54108 245 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 AP1S2P56377 157 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 RAPSNQ13702 412 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 GRB14Q14449 540 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 KCNJ11Q14654 390 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 SWI5Q1ZZU3 235 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 EML3Q32P44 896 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 FAM91A1Q658Y4 838 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 CYP4V2Q6ZWL3 525 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 LRRC70Q7Z2Q7 622 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 SIDT2Q8NBJ9 832 aaKnown RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 PSMG2Q969U7 264 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 EXOSC8Q96B26 276 aaKnown RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 RNF31Q96EP0 1072 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 CLCC1Q96S66 551 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 MGME1Q9BQP7 344 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 COMMD4Q9H0A8 199 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 TPK1Q9H3S4 243 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 C14orf105Q9NVL8 296 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 COL20A1Q9P218 1284 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 SLC7A8Q9UHI5 535 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 GPN3Q9UHW5 284 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 DGKBQ9Y6T7 804 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 HMGN1P05114 100 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 CBSLP0DN79 551 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 NT5EP21589 574 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 CBSP35520 551 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 RORCP51449 518 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 SLC18A2Q05940 514 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 COL9A3Q14050 684 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 ZBED5Q49AG3 693 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 IQCCQ4KMZ1 466 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 PLEKHG4Q58EX7 1191 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 CHADLQ6NUI6 762 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 DUS1LQ6P1R4 473 aaKnown RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 TRMT10BQ6PF06 316 aaKnown RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 RELL1Q8IUW5 271 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 OR4C6Q8NH72 309 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 NDRG1Q92597 394 aaKnown RBP6.89□□□□□ -1.31
CTNND1-236ENST00000533667 C5orf34Q96MH7 638 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 PCDHGC4Q9Y5F7 938 aa6.89□□□□□ -1.31
CTNND1-236ENST00000533667 TEX46H3BTG2 121 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 RSL1D1O76021 490 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 STBD1O95210 358 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 CYP11A1P05108 521 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 GSTM3P21266 225 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 DNAJA1P31689 397 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 CLCN4P51793 760 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PPP2R2BQ00005 443 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 CA9Q16790 459 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 VARS2Q5ST30 1063 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 TPGS2Q68CL5 300 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 MSANTD2Q6P1R3 559 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 RFWD3Q6PCD5 774 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 MBOAT1Q6ZNC8 495 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ADGRG6Q86SQ4 1221 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 LDB1Q86U70 411 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SATL1Q86VE3 508 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 CFAP206Q8IYR0 622 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 TSEN15Q8WW01 171 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ACOT12Q8WYK0 555 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SLC9A6Q92581 669 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF570Q96NI8 536 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 EQTNQ9NQ60 294 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SLC38A8A6NNN8 435 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 C2orf74A8MZ97 194 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 TLL1O43897 1013 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PRMT3O60678 531 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PRAMEF12O95522 483 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 CD2P06729 351 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 OR4Q2P0C623 313 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PEPDP12955 493 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PORP16435 677 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 VARSP26640 1264 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SLC6A4P31645 630 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 FLT3LGP49771 235 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ILF3Q12906 894 aaKnown RBP eCLIP6.88□□□□□ -1.312e-7■■□□□ 13.8
CTNND1-236ENST00000533667 SYCE2Q6PIF2 218 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 FRMD7Q6ZUT3 714 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms