RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SLC22A15Q8IZD6 547 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 SLC35F6Q8N357 371 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 LINC01555Q8NAE3 123 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 IL17FQ96PD4 163 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 AP1M1Q9BXS5 423 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 TRIM55Q9BYV6 548 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 P2RY12Q9H244 342 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 CHST8Q9H2A9 424 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 CATSPERZQ9NTU4 200 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 IL1RAPL1Q9NZN1 696 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 PYCARDQ9ULZ3 195 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 ZKSCAN5Q9Y2L8 839 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 KLHL20Q9Y2M5 609 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 PCDHGA6Q9Y5G7 932 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 CCDC88CQ9P219 2028 aa17.23■□□□□ 0.35
SMG1-203ENST00000532700 CPNE3O75131 537 aaKnown RBP17.22■□□□□ 0.35
SMG1-203ENST00000532700 GPC4O75487 556 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 PDGFAP04085 211 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 CHRM5P08912 532 aaPredicted RBP17.22■□□□□ 0.35
SMG1-203ENST00000532700 OR56A5P0C7T3 313 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 RORAP35398 523 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 PRAMEP78395 509 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 CCSMST1Q4G0I0 132 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 SYTL3Q4VX76 610 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 CPZQ66K79 652 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 FAM198BQ6UWH4 519 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 GSTA5Q7RTV2 222 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 AGGF1Q8N302 714 aaeCLIP17.22■□□□□ 0.35
SMG1-203ENST00000532700 C2orf73Q8N5S3 287 aaPredicted RBP17.22■□□□□ 0.35
SMG1-203ENST00000532700 OR5K2Q8NHB8 316 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 ABHD17AQ96GS6 310 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 SGSM3Q96HU1 749 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 CATSPER2Q96P56 530 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 EFHD1Q9BUP0 239 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 FAM117AQ9C073 453 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 ADNPQ9H2P0 1102 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 HOMER3Q9NSC5 361 aa17.22■□□□□ 0.35
SMG1-203ENST00000532700 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMG1-203ENST00000532700 PIPSLA2A3N6 862 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 USP27XA6NNY8 438 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 C2orf74A8MZ97 194 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 CD3EAPO15446 510 aaKnown RBP17.21■□□□□ 0.35
SMG1-203ENST00000532700 GAS8O95995 478 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 GSTM1P09488 218 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 CCNYL3P0C7X3 344 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 AOAHP28039 575 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 FOXL2P58012 376 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 GSTM4Q03013 218 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 HSPA14Q0VDF9 509 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 CHAF1BQ13112 559 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 PTCHD3Q3KNS1 767 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 CRTC2Q53ET0 693 aaPredicted RBP17.21■□□□□ 0.35
SMG1-203ENST00000532700 TAX1BP1Q86VP1 789 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 CAND1Q86VP6 1230 aaKnown RBP17.21■□□□□ 0.35
SMG1-203ENST00000532700 TBC1D21Q8IYX1 336 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 DSELQ8IZU8 1212 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 CARFQ8N187 725 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 RASGEF1CQ8N431 466 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 COG1Q8WTW3 980 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 MR1Q95460 341 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 FCRL4Q96PJ5 515 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 NAP1L3Q99457 506 aaPredicted RBP17.21■□□□□ 0.35
SMG1-203ENST00000532700 LATS2Q9NRM7 1088 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 PCMTD2Q9NV79 361 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 GALPQ9UBC7 116 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 TSR3Q9UJK0 312 aaKnown RBP17.21■□□□□ 0.35
SMG1-203ENST00000532700 NEU2Q9Y3R4 380 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 NFS1Q9Y697 457 aa17.21■□□□□ 0.35
SMG1-203ENST00000532700 TPSB2P20231 275 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 PKLRP30613 574 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 TPSAB1Q15661 275 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 LYPLAL1Q5VWZ2 237 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 ZNF385CQ66K41 422 aaPredicted RBP17.2■□□□□ 0.34
SMG1-203ENST00000532700 NLRP9Q7RTR0 991 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 C19orf47Q8N9M1 422 aaKnown RBP17.2■□□□□ 0.34
SMG1-203ENST00000532700 CFAP61Q8NHU2 1237 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 APOBEC4Q8WW27 367 aaKnown RBP17.2■□□□□ 0.34
SMG1-203ENST00000532700 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMG1-203ENST00000532700 FAM136AQ96C01 138 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 BIRC8Q96P09 236 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 KIFC1Q9BW19 673 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 CARD6Q9BX69 1037 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 SPRTNQ9H040 489 aaPredicted RBP17.2■□□□□ 0.34
SMG1-203ENST00000532700 TP53TG5Q9Y2B4 290 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 PCDHB3Q9Y5E6 796 aa17.2■□□□□ 0.34
SMG1-203ENST00000532700 MED13Q9UHV7 2174 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 MEN1O00255 615 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 MATN2O00339 956 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 QSOX1O00391 747 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 NRP2O60462 931 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 VAPBO95292 243 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 MT-ND3P03897 115 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 ATXN8OSP0DMR3 200 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 PTPN4P29074 926 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 SHMT2P34897 504 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 BDKRB1P46663 353 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 GNG11P61952 73 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 MC1RQ01726 317 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 GPS1Q13098 491 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 TMTC4Q5T4D3 741 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms