RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 AHSGP02765 367 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 SLC6A2P23975 617 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 CD6P30203 668 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 STC1P52823 247 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 HEPACAMQ14CZ8 416 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 SAMD4BQ5PRF9 694 aaKnown RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 THOC6Q86W42 341 aaKnown RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 TTLQ8NG68 377 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 UGT2B28Q9BY64 529 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 USE1Q9NZ43 259 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 ZNF180Q9UJW8 692 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 GOLGA4Q13439 2230 aaKnown RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 DDX60LQ5H9U9 1706 aaKnown RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 SERPINB7O75635 380 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 EPOP01588 193 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 UROSP10746 265 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 CCND1P24385 295 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 RCN1Q15293 331 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 CASP12Q6UXS9 341 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 MREGQ8N565 214 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 LINC01465Q8N7H1 131 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 ZDHHC1Q8WTX9 485 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 TFB2MQ9H5Q4 396 aaKnown RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 ZNF358Q9NW07 568 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 SNX7Q9UNH6 387 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 C2orf74A8MZ97 194 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 TRIM24O15164 1050 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 SNUPNO95149 360 aaKnown RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 SIX3O95343 332 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 PTPN4P29074 926 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 HNMTP50135 292 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 VSX2P58304 361 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 MTAPQ13126 283 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 SMAD4Q13485 552 aaKnown RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 OASLQ15646 514 aaKnown RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 TOR1AIP1Q5JTV8 583 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 EID3Q8N140 333 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 CADM2Q8N3J6 435 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 CPXM2Q8N436 756 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 LIX1Q8N485 282 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 SLC13A3Q8WWT9 602 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 ZNF607Q96SK3 696 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 ADAP2Q9NPF8 381 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 GRHL1Q9NZI5 618 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 LYVE1Q9Y5Y7 322 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 ME2P23368 584 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 FASP25445 335 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 HLA-FP30511 346 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 PNLIPRP1P54315 467 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 NFKB2Q00653 900 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 PLGLB1Q02325 96 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 NIPAL4Q0D2K0 466 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 ANKRD46Q86W74 232 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 CILP2Q8IUL8 1156 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 ZNF248Q8NDW4 579 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 OR9A1PQ8NGU1 263 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 LINC01599Q8WXQ3 324 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 C5orf34Q96MH7 638 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 OSBPL7Q9BZF2 842 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 CSNK1G1Q9HCP0 422 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 CNOT6Q9ULM6 557 aaKnown RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 CXorf49A8MYA2 514 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 MCIDASD6RGH6 385 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 PRAMEF26H0Y7S4 382 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 ABLIM3O94929 683 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 F11P03951 625 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 SHMT2P34897 504 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 GRIN2CQ14957 1233 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 AGTRAPQ6RW13 159 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 FAM92BQ6ZTR7 304 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 RABEPKQ7Z6M1 372 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 ALYREFQ86V81 257 aaKnown RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 OR2T34Q8NGX1 318 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 VANGL1Q8TAA9 524 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 DTNBP1Q96EV8 351 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 RBCK1Q9BYM8 510 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 CPEB1Q9BZB8 566 aaKnown RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 KCNK12Q9HB15 430 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 TRIM39Q9HCM9 518 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 A0A1B0GUL6 1792 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 PRRC2BQ5JSZ5 2229 aaKnown RBP7.79□□□□□ -1.16
CTNND1-230ENST00000532245 AKAP11Q9UKA4 1901 aa7.79□□□□□ -1.16
CTNND1-230ENST00000532245 OR5K4A6NMS3 321 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 COX4I1P13073 169 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 CCKBRP32239 447 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 AP1S2P56377 157 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 MRPS21P82921 87 aaKnown RBP7.78□□□□□ -1.16
CTNND1-230ENST00000532245 MEF2AQ02078 507 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-230ENST00000532245 HHEXQ03014 270 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 TMEM156Q8N614 296 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 CHFRQ96EP1 664 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 CNBD2Q96M20 576 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 DUSP12Q9UNI6 340 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 RGSL1A5PLK6 1076 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 CAPN8A6NHC0 703 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 SMNDC1O75940 238 aaKnown RBP eCLIP7.78□□□□□ -1.16
CTNND1-230ENST00000532245 AP2A2O94973 939 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 EGFP01133 1207 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 CBSLP0DN79 551 aa7.78□□□□□ -1.16
CTNND1-230ENST00000532245 CCNA2P20248 432 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms