RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 NDUFAF2Q8N183 169 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 RIBC1Q8N443 379 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ACTL9Q8TC94 416 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ADAMTS17Q8TE56 1095 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 NSMCE1Q8WV22 266 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 C19orf60Q96EN9 201 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC41A2Q96JW4 573 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 PPM1MQ96MI6 270 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 RNF157Q96PX1 679 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 TRIB3Q96RU7 358 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 INSM2Q96T92 566 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC25A23Q9BV35 468 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 MLPHQ9BV36 600 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SPATA16Q9BXB7 569 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 CEP41Q9BYV8 373 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ZNF395Q9H8N7 513 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 TRIM39Q9HCM9 518 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 CASS4Q9NQ75 786 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 PKD2L2Q9NZM6 624 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SEMA5BQ9P283 1151 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ERRFI1Q9UJM3 462 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SHOC2Q9UQ13 582 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 CELSR2Q9HCU4 2923 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 CROCCQ5TZA2 2017 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 CRYBG3Q68DQ2 2970 aa8.34□□□□□ -1.08
TGFBR3-208ENST00000529608 SPTBN1Q01082 2364 aaKnown RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 A0A087WUV0 522 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 WIPF3A6NGB9 483 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 PDZK1P1A8MUH7 402 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 C21orf140B9A014 251 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 KCNK1O00180 336 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 AURKAO14965 403 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 GPR39O43194 453 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 ZNF189O75820 626 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 CEACAM4O75871 244 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 SLC4A1P02730 911 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 CCNCP24863 283 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 PTPN4P29074 926 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 HPDP32754 393 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 MAGEA4P43358 317 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 VPS41P49754 854 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 PGDP52209 483 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 EIF3EP60228 445 aaKnown RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 TUBB3Q13509 450 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 KRT81Q14533 505 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 KYNUQ16719 465 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 RNASEH2BQ5TBB1 312 aaKnown RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 JMJD6Q6NYC1 403 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 ZNF517Q6ZMY9 492 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 FAM83HQ6ZRV2 1179 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 CENPUQ71F23 418 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 LRRTM4Q86VH4 590 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 TMEM151BQ8IW70 566 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 TRIM48Q8IWZ4 208 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 PPIL6Q8IXY8 311 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 PQLC3Q8N755 202 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 RBMXL3Q8N7X1 1067 aaKnown RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 FDCSPQ8NFU4 85 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 BCAS4Q8TDM0 211 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 P3H4Q92791 437 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 GLYATL1Q969I3 302 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 HAUS1Q96CS2 278 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 TSGA13Q96PP4 275 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 MAP3K3Q99759 626 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 ZNF670Q9BS34 389 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 NUDT9Q9BW91 350 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 RAB33BQ9H082 229 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 FAM107BQ9H098 131 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 ING2Q9H160 280 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 POT1Q9NUX5 634 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 NINJ2Q9NZG7 142 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 EPHA6Q9UF33 1036 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 PCDHGA9Q9Y5G4 932 aaKnown RBP8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 SPO11Q9Y5K1 396 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 ESPL1Q14674 2120 aa8.33□□□□□ -1.08
TGFBR3-208ENST00000529608 CCDC88CQ9P219 2028 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 RGSL1A5PLK6 1076 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 GMNCA6NCL1 334 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 E7EVH7 732 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 EBAG9O00559 213 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 NDUFAB1O14561 156 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 APOL1O14791 398 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 KMOO15229 486 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 CDH16O75309 829 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 LDLRP01130 860 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 JCHAINP01591 159 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 MT-ND3P03897 115 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 CAPN1P07384 714 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 RBP3P10745 1247 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 BPIP17213 487 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 RPL22P35268 128 aaKnown RBP8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 NR2C2P49116 596 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 CTSCP53634 463 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 ITGA1P56199 1179 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 ARL4CP56559 192 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 RPL26P61254 145 aaKnown RBP8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 DYNLT1P63172 113 aa8.32□□□□□ -1.08
TGFBR3-208ENST00000529608 GUCY1A3Q02108 690 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms