RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 BIRC8Q96P09 236 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 SLC12A9Q9BXP2 914 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 XKR8Q9H6D3 395 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 GPN2Q9H9Y4 310 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 INTS10Q9NVR2 710 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 ACTR10Q9NZ32 417 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 RPS6KL1Q9Y6S9 549 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 PCM1Q15154 2024 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 NBEAQ8NFP9 2946 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 LOC101059948A0A1B0GTJ6 334 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 ZCWPW2A0A1B0GU75 182 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 PIPSLA2A3N6 862 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 SLC9B1P1A6NJY1 282 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 ZNF891A8MT65 544 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 GOLGA8KD6RF30 607 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 GOLGA8TH3BQL2 631 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 SMAPO00193 183 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 KIAA0754O94854 1291 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 S1PR4O95977 384 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 CCNYL3P0C7X3 344 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 ZNF28P17035 718 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 FMO4P31512 558 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 STAT5AP42229 794 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 CSE1LP55060 971 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 EIF3BP55884 814 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 ABRQ12979 859 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 THOC5Q13769 683 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 KCNAB1Q14722 419 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 CRTC2Q53ET0 693 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 TAF1BQ53T94 588 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 CTSL3PQ5NE16 218 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 TTC23LQ6PF05 361 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 SPESP1Q6UW49 350 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 CENPUQ71F23 418 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 VRK3Q8IV63 474 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 GSDMBQ8TAX9 411 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 CALML6Q8TD86 181 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 ZNF501Q96CX3 271 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 ELMO2Q96JJ3 720 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 PPM1MQ96MI6 270 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 TRAPPC9Q96Q05 1148 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 NAT9Q9BTE0 207 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 CHRNA10Q9GZZ6 450 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 ASIC3Q9UHC3 531 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 PADI1Q9ULC6 663 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 TDRKHQ9Y2W6 561 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 FAM169AQ9Y6X4 670 aa11.73□□□□□ -0.53
TRAPPC4-209ENST00000528230 CHRM5P08912 532 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 PKMP14618 531 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 ST6GAL1P15907 406 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 IVDP26440 423 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 ATP5DP30049 168 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 RAB28P51157 221 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 MC1RQ01726 317 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 KIR2DS3Q14952 304 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 LONRF1Q17RB8 773 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 PWWP2BQ6NUJ5 590 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 FBXO38Q6PIJ6 1188 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 DCUN1D3Q8IWE4 304 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 AGGF1Q8N302 714 aaeCLIP11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 GALNT6Q8NCL4 622 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 MAGEC3Q8TD91 643 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 RAD51AP1Q96B01 352 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 STAMBPL1Q96FJ0 436 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 TCTN2Q96GX1 697 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 CAPZA3Q96KX2 299 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 FOPNLQ96NB1 174 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 CATSPER2Q96P56 530 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 OR2A14Q96R47 310 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 NRTNQ99748 197 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 MENTQ9BUN1 341 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 FAM117AQ9C073 453 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 FANCEQ9HB96 536 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 SOHLH2Q9NX45 425 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 KLHL42Q9P2K6 505 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 LNPEPQ9UIQ6 1025 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 CRYL1Q9Y2S2 319 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 PCDHB3Q9Y5E6 796 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 MAD1L1Q9Y6D9 718 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 SNRNP200O75643 2136 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 SPTBP11277 2137 aa11.72□□□□□ -0.53
TRAPPC4-209ENST00000528230 IGSF10Q6WRI0 2623 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 TERTO14746 1132 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 TIAF1O95411 115 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 TTC4O95801 387 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 RECKO95980 971 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 UGT2B7P16662 529 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 PGAM1P18669 254 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 CHRM3P20309 590 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 CD9P21926 228 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 PKLRP30613 574 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 CCNFP41002 786 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 DR1Q01658 176 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 GRB7Q14451 532 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 GBX1Q14549 363 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 MORF4L2Q15014 288 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 GPR19Q15760 415 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 SLC5A12Q1EHB4 618 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 LINC00303Q3SY05 128 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 IZUMO3Q5VZ72 239 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms