RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 IL17FQ96PD4 163 aa13.35□□□□□ -0.27
CD44-224ENST00000526669 STN1Q9H668 368 aaKnown RBP13.35□□□□□ -0.27
CD44-224ENST00000526669 XKR8Q9H6D3 395 aa13.35□□□□□ -0.27
CD44-224ENST00000526669 ALG9Q9H6U8 611 aa13.35□□□□□ -0.27
CD44-224ENST00000526669 TMBIM4Q9HC24 238 aa13.35□□□□□ -0.27
CD44-224ENST00000526669 POT1Q9NUX5 634 aa13.35□□□□□ -0.27
CD44-224ENST00000526669 UTP6Q9NYH9 597 aaKnown RBP13.35□□□□□ -0.27
CD44-224ENST00000526669 LRIT1Q9P2V4 623 aa13.35□□□□□ -0.27
CD44-224ENST00000526669 NCF1BA6NI72 391 aaPredicted RBP13.34□□□□□ -0.27
CD44-224ENST00000526669 GOLGA6L10A6NI86 522 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 NCF1CA8MVU1 366 aaPredicted RBP13.34□□□□□ -0.27
CD44-224ENST00000526669 MAP2K7O14733 419 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 GUCA1CO95843 209 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 C8GP07360 202 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 NCF1P14598 390 aaPredicted RBP13.34□□□□□ -0.27
CD44-224ENST00000526669 KRT4P19013 534 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 CYP2A7P20853 494 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 CCNFP41002 786 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 FASLGP48023 281 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 RPIAP49247 311 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 FAM83EQ2M2I3 478 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 CCDC157Q569K6 752 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 SBSNQ6UWP8 590 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 TMEM26Q6ZUK4 368 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 FRA10AC1Q70Z53 315 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 CLEC14AQ86T13 490 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 CROCCP2Q86T23 111 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 TAX1BP1Q86VP1 789 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 TBC1D21Q8IYX1 336 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
CD44-224ENST00000526669 OR52E1Q8NGJ3 308 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 IFI44Q8TCB0 444 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 ACMSDQ8TDX5 336 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 ASB11Q8WXH4 323 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 ARL8AQ96BM9 186 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 PDLIM5Q96HC4 596 aaKnown RBP13.34□□□□□ -0.27
CD44-224ENST00000526669 SLC38A3Q99624 504 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 C12orf65Q9H3J6 166 aaKnown RBP13.34□□□□□ -0.27
CD44-224ENST00000526669 MVB12BQ9H7P6 319 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 SYNDIG1Q9H7V2 258 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 NMRAL1Q9HBL8 299 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 SLC40A1Q9NP59 571 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.34□□□□□ -0.27
CD44-224ENST00000526669 PDE10AQ9Y233 779 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 COLEC10Q9Y6Z7 277 aa13.34□□□□□ -0.27
CD44-224ENST00000526669 KNTC1P50748 2209 aa13.33□□□□□ -0.27
CD44-224ENST00000526669 PIEZO1Q92508 2521 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 GFYI3L273 518 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 DYNC1I1O14576 645 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 COPEO14579 308 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 CBFA2T3O75081 653 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 RPN2P04844 631 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 TPBGLP0DKB5 382 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 TYRP1P17643 537 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 MAP4P27816 1152 aaKnown RBP13.33□□□□□ -0.28
CD44-224ENST00000526669 NDUFS1P28331 727 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 ALDH4A1P30038 563 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 LIMK1P53667 647 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 OR1D5P58170 312 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 ATP6V0D1P61421 351 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 SP140Q13342 867 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 GRB7Q14451 532 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 TECRLQ5HYJ1 363 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 TTC23LQ6PF05 361 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 CDHR3Q6ZTQ4 885 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 SH2D5Q6ZV89 423 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 CCDC91Q7Z6B0 441 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 PIP4P1Q86T03 277 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 ADAMTSL2Q86TH1 951 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 ALYREFQ86V81 257 aaKnown RBP13.33□□□□□ -0.28
CD44-224ENST00000526669 RASGRP3Q8IV61 690 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 OR4E2Q8NGC2 313 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 BAHD1Q8TBE0 780 aaPredicted RBP13.33□□□□□ -0.28
CD44-224ENST00000526669 NETO1Q8TDF5 533 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 GPR78Q96P69 363 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 PKP4Q99569 1192 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 KIR3DX1Q9H7L2 352 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 VIPAS39Q9H9C1 493 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 RNF112Q9ULX5 631 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 NOVA2Q9UNW9 492 aaKnown RBP13.33□□□□□ -0.28
CD44-224ENST00000526669 ICKQ9UPZ9 632 aa13.33□□□□□ -0.28
CD44-224ENST00000526669 EME2A4GXA9 379 aaPredicted RBP13.32□□□□□ -0.28
CD44-224ENST00000526669 PABPN1LA6NDY0 278 aaKnown RBP13.32□□□□□ -0.28
CD44-224ENST00000526669 SUPT3HB4E1H0 165 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 UBXN8O00124 270 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 TK2O00142 265 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 SLC16A5O15375 505 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 GLRA3O75311 464 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 SUPT3HO75486 399 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 CKMT1AP12532 417 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 GLB1P16278 677 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 CKMT2P17540 419 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 SLC26A3P40879 764 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 KCNC1P48547 511 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 DUSP3P51452 185 aaPredicted RBP13.32□□□□□ -0.28
CD44-224ENST00000526669 SLC18A2Q05940 514 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 TSTA3Q13630 321 aaPredicted RBP13.32□□□□□ -0.28
CD44-224ENST00000526669 PPP1R3AQ16821 1122 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 TSNAXIP1Q2TAA8 658 aa13.32□□□□□ -0.28
CD44-224ENST00000526669 C18orf21Q32NC0 220 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms