RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 OGFRQ9NZT2 677 aa20.17■□□□□ 0.82
CD44-222ENST00000526025 PDP2Q9P2J9 529 aa20.17■□□□□ 0.82
CD44-222ENST00000526025 NFS1Q9Y697 457 aa20.17■□□□□ 0.82
CD44-222ENST00000526025 MN1Q10571 1320 aaPredicted RBP20.17■□□□□ 0.82
CD44-222ENST00000526025 POC1B-GALNT4F8VUJ3 575 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 TMX2-CTNND1H3BSU7 103 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 MYO1CO00159 1063 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 MT-CO3P00414 261 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 NUDT17P0C025 328 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 SAT1P21673 171 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 KCNA4P22459 653 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 GCAP28676 217 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 SERPINB8P50452 374 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 GRB7Q14451 532 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 NAA30Q147X3 362 aaPredicted RBP20.16■□□□□ 0.82
CD44-222ENST00000526025 HES3Q5TGS1 186 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 TMEM71Q6P5X7 295 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 TMEM207Q6UWW9 146 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 TMPRSS7Q7RTY8 843 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 PLXDC1Q8IUK5 500 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 OR4D9Q8NGE8 314 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 MTBPQ96DY7 904 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 DEPDC7Q96QD5 511 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 DERL2Q9GZP9 239 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 OR6C2Q9NZP2 312 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 SPATA7Q9P0W8 599 aa20.16■□□□□ 0.82
CD44-222ENST00000526025 OR5K3A6NET4 321 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 ARHGEF33A8MVX0 844 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 ZBTB14O43829 449 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 KRT37O76014 449 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 AMD1P17707 334 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 CCKBRP32239 447 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 CSF2RBP32927 897 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 MAGEA12P43365 314 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 RAB28P51157 221 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 PRKG2Q13237 762 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 AMZ1Q400G9 498 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 MROH9Q5TGP6 573 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 ERMP1Q7Z2K6 904 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 AMIGO1Q86WK6 493 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 OOSP2Q86WS3 158 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 TDRPQ86YL5 185 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 RAB42Q8N4Z0 105 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 MRRFQ96E11 262 aaKnown RBP20.15■□□□□ 0.82
CD44-222ENST00000526025 UBXN10Q96LJ8 280 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 TMEM74Q96NL1 305 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 MENTQ9BUN1 341 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 SLC12A9Q9BXP2 914 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 SRMSQ9H3Y6 488 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 CAB39LQ9H9S4 337 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 PSMC3IPQ9P2W1 217 aaPredicted RBP20.15■□□□□ 0.82
CD44-222ENST00000526025 NOVA2Q9UNW9 492 aaKnown RBP20.15■□□□□ 0.82
CD44-222ENST00000526025 ICKQ9UPZ9 632 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 CLCA2Q9UQC9 943 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 RUVBL2Q9Y230 463 aaKnown RBP20.15■□□□□ 0.82
CD44-222ENST00000526025 PCM1Q15154 2024 aa20.15■□□□□ 0.82
CD44-222ENST00000526025 CCDC189A1A4V9 331 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 CCDC151A5D8V7 595 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 CTIFO43310 598 aaKnown RBP20.14■□□□□ 0.81
CD44-222ENST00000526025 C9P02748 559 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 SNRPAP09012 282 aaKnown RBP20.14■□□□□ 0.81
CD44-222ENST00000526025 ENO2P09104 434 aaPredicted RBP20.14■□□□□ 0.81
CD44-222ENST00000526025 TPBGLP0DKB5 382 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 ERGP11308 486 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 MAP4P27816 1152 aaKnown RBP20.14■□□□□ 0.81
CD44-222ENST00000526025 PKLRP30613 574 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 HSD17B2P37059 387 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 PDX1P52945 283 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 CFHR1Q03591 330 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 ZFP36L1Q07352 338 aaKnown RBP20.14■□□□□ 0.81
CD44-222ENST00000526025 TRA2AQ13595 282 aaKnown RBP eCLIP20.14■□□□□ 0.81
CD44-222ENST00000526025 ZNF460Q14592 562 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 ARHGAP19Q14CB8 494 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.14■□□□□ 0.81
CD44-222ENST00000526025 NKAIN2Q5VXU1 208 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 SLITRK4Q8IW52 837 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 CARFQ8N187 725 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 HMGCLL1Q8TB92 370 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 RSC1A1Q92681 617 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 CD180Q99467 661 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 TDRKHQ9Y2W6 561 aaKnown RBP20.14■□□□□ 0.81
CD44-222ENST00000526025 ENTPD2Q9Y5L3 495 aa20.14■□□□□ 0.81
CD44-222ENST00000526025 A0A087X1B8 175 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 RASGRF2O14827 1237 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 TOX3O15405 576 aaPredicted RBP20.13■□□□□ 0.81
CD44-222ENST00000526025 PHGDHO43175 533 aaKnown RBP20.13■□□□□ 0.81
CD44-222ENST00000526025 ERLIN1O75477 346 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 ALDOAP04075 364 aaKnown RBP20.13■□□□□ 0.81
CD44-222ENST00000526025 SLC35E2BP0CK96 405 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 TYRP1P17643 537 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 CYP2A7P20853 494 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 BDKRB1P46663 353 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 ATP6V0D1P61421 351 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 BMPR2Q13873 1038 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 ISXQ2M1V0 245 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 TIFABQ6ZNK6 161 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 UBE2R2Q712K3 238 aaPredicted RBP20.13■□□□□ 0.81
CD44-222ENST00000526025 OR4E2Q8NGC2 313 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 OR9A1PQ8NGU1 263 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 OR2L8Q8NGY9 312 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms