RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PRKACAP17612 351 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 HIST1H2ADP20671 130 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 EDN2P20800 178 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 ITGB8P26012 769 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 PSMB4P28070 264 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 PRDX6P30041 224 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 ATP5C1P36542 298 aaKnown RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 ADCY8P40145 1251 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 SLC1A3P43003 542 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 MAGEB1P43366 347 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 ARHGDIBP52566 201 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 HNRNPKP61978 463 aaKnown RBP eCLIP4.37□□□□□ -1.71
CD44-213ENST00000525209 XIAPP98170 497 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 HSF2Q03933 536 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 EGR4Q05215 589 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 DMPKQ09013 629 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 E2F2Q14209 437 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 STXBP2Q15833 593 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 TPD52L1Q16890 204 aaPredicted RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 FAM83EQ2M2I3 478 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 EDRF1Q3B7T1 1238 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 ANKRD55Q3KP44 614 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 WDR72Q3MJ13 1102 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 SPANXN2Q5MJ10 180 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 LRRC38Q5VT99 294 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 GRHL2Q6ISB3 625 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 KDM7AQ6ZMT4 941 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 BZW1Q7L1Q6 419 aaKnown RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 HIST3H2AQ7L7L0 130 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 TRMT11Q7Z4G4 463 aaKnown RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 MISPQ8IVT2 679 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 SPACA3Q8IXA5 215 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 C12orf56Q8IXR9 622 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 KLHDC8AQ8IYD2 350 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 ZDHHC23Q8IYP9 409 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 SHISA5Q8N114 240 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 GHDCQ8N2G8 530 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 FITM2Q8N6M3 262 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 TTLL6Q8N841 843 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 BCORP1Q8N888 145 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 NECAB1Q8N987 351 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 C7orf57Q8NEG2 295 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 DNAAF1Q8NEP3 725 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 PAQR8Q8TEZ7 354 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 PDCD6IPQ8WUM4 868 aaKnown RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 MITD1Q8WV92 249 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 ALG3Q92685 438 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 RFKQ969G6 155 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 ULK4Q96C45 1275 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 SLC7A6OSQ96CW6 309 aaPredicted RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 MUS81Q96NY9 551 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 BTBD9Q96Q07 612 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 COQ7Q99807 217 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 SMOQ99835 787 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 NUP58Q9BVL2 599 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 C1QTNF5Q9BXJ0 243 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 RHBGQ9H310 441 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 FN3KQ9H479 309 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 TMEM231Q9H6L2 316 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 ACTR8Q9H981 624 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 ROPN1Q9HAT0 212 aaPredicted RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 UPF2Q9HAU5 1272 aaKnown RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 CYP3A43Q9HB55 503 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 LY9Q9HBG7 655 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 NEK6Q9HC98 313 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 MMP25Q9NPA2 562 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 MKKSQ9NPJ1 570 aaPredicted RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 FAM207AQ9NSI2 230 aaPredicted RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 GTSE1Q9NYZ3 720 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 STX18Q9P2W9 335 aaKnown RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 WNT16Q9UBV4 365 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 CRLS1Q9UJA2 301 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 DBNLQ9UJU6 430 aaKnown RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 SLC5A6Q9Y289 635 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 TMEM184BQ9Y519 407 aaPredicted RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.37□□□□□ -1.71
CD44-213ENST00000525209 MAU2Q9Y6X3 613 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 MAST3O60307 1309 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 UHRF1BP1Q6BDS2 1440 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 UHRF1BP1LA0JNW5 1464 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 GOLGA3Q08378 1498 aa4.37□□□□□ -1.71
CD44-213ENST00000525209 KDM5BQ9UGL1 1544 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 PREX1Q8TCU6 1659 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.36□□□□□ -1.71
CD44-213ENST00000525209 FAM149AA5PLN7 773 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 IQCF5A8MTL0 148 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 GRXCR1A8MXD5 290 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 CLDN4O14493 209 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 FFAR3O14843 346 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 GPR42O15529 346 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 KCNAB3O43448 404 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 ECE2O60344 883 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 TOM1O60784 492 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 TGM6O95932 706 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 FESP07332 822 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 CAPN1P07384 714 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 PLA2G4BP0C869 781 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 SLC2A3P11169 496 aa4.36□□□□□ -1.71
CD44-213ENST00000525209 VPREB1P12018 145 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms