RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.94■■□□□ 1.16e-6■□□□□ 9.1
PVT1-218ENST00000523328 APCP25054 2843 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 hCG_1818297A0A087WSY0 165 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 HACD1B0YJ81 288 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 SPOPO43791 374 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 ANXA9O76027 345 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 UGT2B7P16662 529 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 ITGALP20701 1170 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 ZNF140P52738 457 aaPredicted RBP21.93■■□□□ 1.1
PVT1-218ENST00000523328 RPA4Q13156 261 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 TFDP3Q5H9I0 405 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 MICALCLQ6ZW33 695 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 OR8K1Q8NGG5 319 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 FLVCR1-AS1Q8TAF5 88 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 WDR77Q9BQA1 342 aaPredicted RBP21.93■■□□□ 1.1
PVT1-218ENST00000523328 C10orf88Q9H8K7 445 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 SPTLC3Q9NUV7 552 aa21.93■■□□□ 1.1
PVT1-218ENST00000523328 NOVA2Q9UNW9 492 aaKnown RBP21.93■■□□□ 1.1
PVT1-218ENST00000523328 AGPSO00116 658 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 E2F3O00716 465 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 ZSCAN9O15535 394 aaPredicted RBP21.92■■□□□ 1.1
PVT1-218ENST00000523328 PSTPIP1O43586 416 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 PRF1P14222 555 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 CDKN1CP49918 316 aaPredicted RBP21.92■■□□□ 1.1
PVT1-218ENST00000523328 TMPRSS15P98073 1019 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 AIMP2Q13155 320 aaKnown RBP21.92■■□□□ 1.1
PVT1-218ENST00000523328 TCEAL1Q15170 157 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 CYP2A13Q16696 494 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 NKAIN1Q4KMZ8 207 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 UNC5AQ6ZN44 842 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 HOOK3Q86VS8 718 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 ZNF655Q8N720 491 aaPredicted RBP21.92■■□□□ 1.1
PVT1-218ENST00000523328 PPP4R1Q8TF05 950 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 CHP1Q99653 195 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 C19orf43Q9BQ61 176 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 SLC22A11Q9NSA0 550 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 SPHK1Q9NYA1 384 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 ZDHHC3Q9NYG2 299 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 SRPK3Q9UPE1 567 aa21.92■■□□□ 1.1
PVT1-218ENST00000523328 ANKRD17O75179 2603 aaKnown RBP21.92■■□□□ 1.1
PVT1-218ENST00000523328 TRBV5-4A0A0C4DH59 114 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 CCL22O00626 93 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 LRRTM2O43300 516 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 CRTAMO95727 393 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 POU3F2P20265 443 aaPredicted RBP21.91■■□□□ 1.1
PVT1-218ENST00000523328 RBL1P28749 1068 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 HIF1AQ16665 826 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 GPR33Q49SQ1 333 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 TLDC1Q6P9B6 456 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 IGFL2Q6UWQ7 119 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 OR5AR1Q8NGP9 310 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 VPS37BQ9H9H4 285 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 TXLNGQ9NUQ3 528 aa21.91■■□□□ 1.1
PVT1-218ENST00000523328 OTOGQ6ZRI0 2925 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 HNRNPRO43390 633 aaKnown RBP21.9■■□□□ 1.1
PVT1-218ENST00000523328 TPBGLP0DKB5 382 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 ITGA3P26006 1051 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 ELAVL4P26378 380 aaKnown RBP21.9■■□□□ 1.1
PVT1-218ENST00000523328 ACRV1P26436 265 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 ZRSR2Q15696 482 aaKnown RBP21.9■■□□□ 1.1
PVT1-218ENST00000523328 ITPRIPL1Q6GPH6 555 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 DNAJC22Q8N4W6 341 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 CLDN19Q8N6F1 224 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 MARVELD3Q96A59 401 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 NACC2Q96BF6 587 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 SLC6A20Q9NP91 592 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 ENTPD4Q9Y227 616 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 OSGIN2Q9Y236 505 aa21.9■■□□□ 1.1
PVT1-218ENST00000523328 A0A0J9YY10 115 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 CHRM5P08912 532 aaPredicted RBP21.89■■□□□ 1.09
PVT1-218ENST00000523328 PRSS56P0CW18 603 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 PSMB4P28070 264 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 MC4RP32245 332 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 SHMT2P34897 504 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 TSFMP43897 325 aaKnown RBP21.89■■□□□ 1.09
PVT1-218ENST00000523328 GCGRP47871 477 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 DENND5AQ6IQ26 1287 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 ZNF449Q6P9G9 518 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 SERPINA9Q86WD7 417 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 GRHL3Q8TE85 626 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 GOLPH3Q9H4A6 298 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 FBXL4Q9UKA2 621 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 AAR2Q9Y312 384 aaKnown RBP21.89■■□□□ 1.09
PVT1-218ENST00000523328 ALG6Q9Y672 507 aa21.89■■□□□ 1.09
PVT1-218ENST00000523328 ALOX12BO75342 701 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 ZRANB2O95218 330 aaKnown RBP eCLIP21.88■■□□□ 1.09
PVT1-218ENST00000523328 ITGAXP20702 1163 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 MMP11P24347 488 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 ACADLP28330 430 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 MARCKSL1P49006 195 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 PER3P56645 1201 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 PRAMEF13Q5VWM6 474 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 BBS12Q6ZW61 710 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 KATNAL2Q8IYT4 538 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 FAR1Q8WVX9 515 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 CCDC42Q96M95 316 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 ANP32EQ9BTT0 268 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 NHEJ1Q9H9Q4 299 aaPredicted RBP21.88■■□□□ 1.09
PVT1-218ENST00000523328 ASF1AQ9Y294 204 aa21.88■■□□□ 1.09
PVT1-218ENST00000523328 ARHGAP10A1A4S6 786 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms