RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SMTNL2Q2TAL5 461 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 Q5PR19 223 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 CCDC122Q5T0U0 273 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 NCR3LG1Q68D85 454 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 KLC3Q6P597 504 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 RNF207Q6ZRF8 634 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 HTR3DQ70Z44 454 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 NRARPQ7Z6K4 114 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 TMCO2Q7Z6W1 182 aaPredicted RBP3.9□□□□□ -1.78
SKP1-209ENST00000522552 ASPGQ86U10 573 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 GPR135Q8IZ08 494 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 OR52J3Q8NH60 311 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 WIPF2Q8TF74 440 aaPredicted RBP3.9□□□□□ -1.78
SKP1-209ENST00000522552 FAR1Q8WVX9 515 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 FBXL8Q96CD0 374 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 NRBF2Q96F24 287 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 LRFN5Q96NI6 719 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 SMC6Q96SB8 1091 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 GAL3ST1Q99999 423 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 PCGF1Q9BSM1 259 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 MTG1Q9BT17 334 aaPredicted RBP3.9□□□□□ -1.78
SKP1-209ENST00000522552 SLC6A17Q9H1V8 727 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 CDT1Q9H211 546 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 EXO5Q9H790 373 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 VAT1LQ9HCJ6 419 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 RAB9BQ9NP90 201 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 PIGVQ9NUD9 493 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 AGPAT5Q9NUQ2 364 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 ETNK2Q9NVF9 386 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 ASNSD1Q9NWL6 643 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 KLHL8Q9P2G9 620 aaPredicted RBP3.9□□□□□ -1.78
SKP1-209ENST00000522552 MALT1Q9UDY8 824 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 IL20RAQ9UHF4 553 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 KCNE5Q9UJ90 142 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 CNOT6Q9ULM6 557 aaKnown RBP3.9□□□□□ -1.78
SKP1-209ENST00000522552 A3GALT2U3KPV4 340 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 A0A075B6Q4 140 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 A0A0U1RQF3 1178 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 TYW5A2RUC4 315 aaKnown RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 FAM149AA5PLN7 773 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 ANKUB1A6NFN9 424 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 ACOD1A6NK06 481 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 STMND1H3BQB6 276 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 CETN3O15182 167 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 FLRT2O43155 660 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 AKAP8O43823 692 aaKnown RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 VPS26AO75436 327 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 KDM4BO94953 1096 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 UGT2B4P06133 528 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 RNASE1P07998 156 aaKnown RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 MYZAPP0CAP1 466 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 CKMT2P17540 419 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 CAPGP40121 348 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 CXCR3P49682 368 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 CYP2J2P51589 502 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 SLC25A3Q00325 362 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 PSG6Q00889 435 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 HSF2Q03933 536 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 PRKAA1Q13131 559 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 SRSF5Q13243 272 aaKnown RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 PLK5Q496M5 336 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 DCST1Q5T197 706 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 VWA5B1Q5TIE3 1220 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 KIF6Q6ZMV9 814 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 PQLC2Q6ZP29 291 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 TRIM74Q86UV6 250 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 TRIM73Q86UV7 250 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 TMEM126BQ8IUX1 230 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 MISPQ8IVT2 679 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 MAPKAPK5Q8IW41 473 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 FUKQ8N0W3 1084 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 D2HGDHQ8N465 521 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 STKLD1Q8NE28 680 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 ATP8B4Q8TF62 1192 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 STARD8Q92502 1023 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 ATOH1Q92858 354 aaPredicted RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 NACC2Q96BF6 587 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 RASD2Q96D21 266 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 C19orf60Q96EN9 201 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 PGM2Q96G03 612 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 KAZALD1Q96I82 304 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 THOC3Q96J01 351 aaKnown RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 ATP6V1G3Q96LB4 118 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 ZNF396Q96N95 335 aaPredicted RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 ADGRE3Q9BY15 652 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 LRRCC1Q9C099 1032 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 FAM192AQ9GZU8 254 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 TOR3AQ9H497 397 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 HAUS4Q9H6D7 363 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 TMEM231Q9H6L2 316 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 WDR6Q9NNW5 1121 aaKnown RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 YAE1D1Q9NRH1 226 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 MBNL3Q9NUK0 354 aaKnown RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 EXOC1Q9NV70 894 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 TRNAU1APQ9NX07 287 aaKnown RBP3.9□□□□□ -1.79
SKP1-209ENST00000522552 SEMA5BQ9P283 1151 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 ATXN10Q9UBB4 475 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 AMFRQ9UKV5 643 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 ERVK-11Q9UQG0 969 aa3.9□□□□□ -1.79
SKP1-209ENST00000522552 A0A0U1RQV5 110 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms