RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 KLF9Q13886 244 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 CALCRLQ16602 461 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 FUT11Q495W5 492 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 LBHQ53QV2 105 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 SYT14P1Q58G82 188 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 CASC4Q6P4E1 433 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 LINGO4Q6UY18 593 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 PLEKHM3Q6ZWE6 761 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 NUP54Q7Z3B4 507 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 FJX1Q86VR8 437 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 COMMD2Q86X83 199 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 NRACQ8N912 160 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 PPFIBP2Q8ND30 876 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 SEPT1Q8WYJ6 367 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 RIT1Q92963 219 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 ZG16BQ96DA0 208 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 DNAJC4Q9NNZ3 241 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 KLHL1Q9NR64 748 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 SMARCAL1Q9NZC9 954 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 SIX4Q9UIU6 781 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 PCDHGA1Q9Y5H4 931 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 SPIN1Q9Y657 262 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 SPATA31D1Q6ZQQ2 1576 aa4.78□□□□□ -1.64
CTNNA1-233ENST00000522052 ZCWPW2A0A1B0GU75 182 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 MED19A0JLT2 244 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 DUXAA6NLW8 204 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 RTCAO00442 366 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 ZBTB14O43829 449 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 WDPCPO95876 746 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 GLUD1P00367 558 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 LINC00271P0C7V0 271 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 UROSP10746 265 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 GM2AP17900 193 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 LBPP18428 481 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 CD27P26842 260 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 CD38P28907 300 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 PTGER4P35408 488 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 HSD17B3P37058 310 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 KCNJ4P48050 445 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 GLUD2P49448 558 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 ISL1P61371 349 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 TRAF3Q13114 568 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 PRKAA1Q13131 559 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 CBX3Q13185 183 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 TWIST1Q15672 202 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 ZNF789Q5FWF6 425 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 MDH1BQ5I0G3 518 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 RAB12Q6IQ22 244 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 CNSTQ6PJW8 725 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 KCTD9Q7L273 389 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 NRARPQ7Z6K4 114 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 TECPR1Q7Z6L1 1165 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 FOXP4Q8IVH2 680 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 RBMXL3Q8N7X1 1067 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 L3MBTL4Q8NA19 623 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 VANGL1Q8TAA9 524 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 SLC20A1Q8WUM9 679 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 CENPTQ96BT3 561 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 DHX58Q96C10 678 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 SCMH1Q96GD3 660 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 SF3B5Q9BWJ5 86 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 ACKR4Q9NPB9 350 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 SERINC1Q9NRX5 453 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 ZNF224Q9NZL3 707 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 C11orf21Q9P2W6 132 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 B3GAT1Q9P2W7 334 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 LRWD1Q9UFC0 647 aa4.77□□□□□ -1.65
CTNNA1-233ENST00000522052 A0A1W2PPK0 400 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 A0A1W2PPW3 197 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 PRR32B1ATL7 298 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 C19orf81C9J6K1 198 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 PPEF2O14830 753 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 PGRMC2O15173 223 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 ZNHIT1O43257 154 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 PPIP5K2O43314 1243 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 WDR1O75083 606 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 SLC16A8O95907 504 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 H1F0P07305 194 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 HOXC6P09630 235 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 SMIM18P0DKX4 95 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 CSF2RAP15509 400 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 PSMB4P28070 264 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 SLC6A6P31641 620 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 PLCD1P51178 756 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 MMP15P51511 669 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 ADARP55265 1226 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 KIAA1024LP59773 190 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 ARF5P84085 180 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 NPRL3Q12980 569 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 SMC1AQ14683 1233 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 SLC39A14Q15043 492 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 RAD9BQ6WBX8 426 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 ARHGAP22Q7Z5H3 698 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 PHLDB2Q86SQ0 1253 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 PTOV1Q86YD1 416 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 ADHFE1Q8IWW8 467 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 ARHGAP24Q8N264 748 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 ZNF619Q8N2I2 560 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 CLIP4Q8N3C7 705 aa4.76□□□□□ -1.65
CTNNA1-233ENST00000522052 CPSF7Q8N684 471 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms