RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ERICH5Q6P6B1 374 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 ENPP7Q6UWV6 458 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 ZNF783Q6ZMS7 281 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 TUBA1AQ71U36 451 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 SVOPLQ8N434 492 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 CPSF7Q8N684 471 aaKnown RBP15.91■□□□□ 0.14
USP42-207ENST00000521713 PACRGLQ8N7B6 248 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 SIDT2Q8NBJ9 832 aaKnown RBP15.91■□□□□ 0.14
USP42-207ENST00000521713 TEFMQ96QE5 360 aaKnown RBP15.91■□□□□ 0.14
USP42-207ENST00000521713 PCDHGA4Q9Y5G9 962 aa15.91■□□□□ 0.14
USP42-207ENST00000521713 KLHL33A6NCF5 533 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 IQCF5A8MTL0 148 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 DLDP09622 509 aaKnown RBP15.9■□□□□ 0.14
USP42-207ENST00000521713 PRPS2P11908 318 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 FAUP35544 74 aaKnown RBP15.9■□□□□ 0.14
USP42-207ENST00000521713 HSF2Q03933 536 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 MTAPQ13126 283 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 FRMD7Q6ZUT3 714 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 OR2T12Q8NG77 320 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 NODALQ96S42 347 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 NPAS2Q99743 824 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 FNDC11Q9BVV2 318 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 NUSAP1Q9BXS6 441 aaKnown RBP15.9■□□□□ 0.14
USP42-207ENST00000521713 TFB2MQ9H5Q4 396 aaKnown RBP15.9■□□□□ 0.14
USP42-207ENST00000521713 SLC1A2P43004 574 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 HKDC1Q2TB90 917 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 SLC9A4Q6AI14 798 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 LPGAT1Q92604 370 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 MS4A4AQ96JQ5 239 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 CEP295NLQ96MC4 621 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 RIOK2Q9BVS4 552 aaKnown RBP15.9■□□□□ 0.14
USP42-207ENST00000521713 NEK6Q9HC98 313 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 SUCOQ9UBS9 1254 aaKnown RBP15.9■□□□□ 0.14
USP42-207ENST00000521713 IRAK3Q9Y616 596 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 MYH2Q9UKX2 1941 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 ZNF487B1APH4 448 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 J3KR12 359 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 PLOD3O60568 738 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 ATF6P18850 670 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 MED22Q15528 200 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 ACSBG2Q5FVE4 666 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 OR13C4Q8NGS5 318 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 NECTIN4Q96NY8 510 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 PRMT3O60678 531 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 DHPSP49366 369 aaPredicted RBP15.9■□□□□ 0.14
USP42-207ENST00000521713 SLC25A11Q02978 314 aaKnown RBP15.9■□□□□ 0.14
USP42-207ENST00000521713 HEPACAMQ14CZ8 416 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 LRRC73Q5JTD7 316 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 LRRTM4Q86VH4 590 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 AZIN2Q96A70 460 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 BRINP2Q9C0B6 783 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 TAS2R1Q9NYW7 299 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 TIMM22Q9Y584 194 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 ALS2Q96Q42 1657 aa15.9■□□□□ 0.14
USP42-207ENST00000521713 ANKRD66B4E2M5 251 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 PDLIM1O00151 329 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 BCKDKO14874 412 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 TFECO14948 347 aaPredicted RBP15.89■□□□□ 0.13
USP42-207ENST00000521713 CFIP05156 583 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 NELFEP18615 380 aaKnown RBP15.89■□□□□ 0.13
USP42-207ENST00000521713 BMPR1AP36894 532 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 COMMD2Q86X83 199 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 DRAXINQ8NBI3 349 aaPredicted RBP15.89■□□□□ 0.13
USP42-207ENST00000521713 SLC43A3Q8NBI5 491 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 TTLQ8NG68 377 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 MTRRQ9UBK8 725 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 LRRC42Q9Y546 428 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 PGRMC2O15173 223 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 TMEM63AO94886 807 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 TIMP1P01033 207 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 GJA5P36382 358 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 TPTEP56180 551 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 TAF13Q15543 124 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 MINDY4Q4G0A6 757 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 RASSF6Q6ZTQ3 369 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 ARMC8Q8IUR7 673 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 CYP2S1Q96SQ9 504 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 KAT8Q9H7Z6 458 aaKnown RBP15.89■□□□□ 0.13
USP42-207ENST00000521713 MARCH7Q9H992 704 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 TMEM138Q9NPI0 162 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 POMPQ9Y244 141 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 NEMP2A6NFY4 417 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 NPHS1O60500 1241 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 PRAMEF11O60813 436 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 LCN1P1Q5VSP4 162 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 IL23RQ5VWK5 629 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 FSTL5Q8N475 847 aaPredicted RBP15.89■□□□□ 0.13
USP42-207ENST00000521713 AGAP2Q99490 1192 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 WDR55Q9H6Y2 383 aaPredicted RBP15.89■□□□□ 0.13
USP42-207ENST00000521713 PHF24Q9UPV7 400 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 MBLAC1A4D2B0 266 aaPredicted RBP15.89■□□□□ 0.13
USP42-207ENST00000521713 CHRNGP07510 517 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 PSMA1P25786 263 aaKnown RBP15.89■□□□□ 0.13
USP42-207ENST00000521713 SOX4Q06945 474 aaPredicted RBP15.89■□□□□ 0.13
USP42-207ENST00000521713 ZBED5Q49AG3 693 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 PITRM1Q5JRX3 1037 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 SIRPB2Q5JXA9 342 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 LYSMD3Q7Z3D4 306 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 NAT8LQ8N9F0 302 aa15.89■□□□□ 0.13
USP42-207ENST00000521713 LRRC20Q8TCA0 184 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms