RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 DERL2Q9GZP9 239 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 GPR27Q9NS67 375 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 OTOGLQ3ZCN5 2332 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 TRBV5-4A0A0C4DH59 114 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 SPTY2D1-AS1A0A0U1RR47 76 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 LOC100653049A0A140TA62 436 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 TMEM233B4DJY2 109 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 KRT34O76011 436 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 ITGAXP20702 1163 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 NXPH1P58417 271 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 ACTR3P61158 418 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 ATP6V0D1P61421 351 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 HERVK_113P63132 956 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 BNC1Q01954 994 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 KIF19Q2TAC6 998 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 UNC50Q53HI1 259 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 TCEAL6Q6IPX3 200 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 DCP2Q8IU60 420 aaKnown RBP21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 CEP70Q8NHQ1 597 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 RP9Q8TA86 221 aaKnown RBP21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 TCEAL3Q969E4 200 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 KIAA1191Q96A73 305 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 CCDC97Q96F63 343 aaPredicted RBP21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 CLPTM1LQ96KA5 538 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 BIRC8Q96P09 236 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 ATOH8Q96SQ7 321 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 ERVK-6Q9BXR3 956 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 OR2AG1Q9H205 316 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 CCDC68Q9H2F9 335 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 MEAF6Q9HAF1 191 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 MRPL40Q9NQ50 206 aaKnown RBP21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 MOSPD1Q9UJG1 213 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 SLC6A14Q9UN76 642 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 SNX11Q9Y5W9 270 aa21.6■■□□□ 1.05
PTP4A3-204ENST00000521578 UBA6A0AVT1 1052 aaPredicted RBP21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 H3BMM5 538 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 CCNT2O60583 730 aaKnown RBP21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 ACRV1P26436 265 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 AKT1P31749 480 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 INHBCP55103 352 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 ADARP55265 1226 aaKnown RBP21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 NHLH1Q02575 133 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 PTK2BQ14289 1009 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 FZD2Q14332 565 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 OR4D1Q15615 310 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 ZNF542PQ5EBM4 170 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 LDLRAP1Q5SW96 308 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 PRAMEF14Q5SWL7 426 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 MACC1Q6ZN28 852 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.59■■□□□ 1.051e-8■■■■■ 81.8
PTP4A3-204ENST00000521578 DDHD1Q8NEL9 900 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 OR56A4Q8NGH8 313 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 NAT14Q8WUY8 206 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 TSACCQ96A04 125 aaPredicted RBP21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 PPP1R36Q96LQ0 422 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 CAAP1Q9H8G2 361 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 CAPN10Q9HC96 672 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 TRIM39Q9HCM9 518 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 FGF22Q9HCT0 170 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 ATXN10Q9UBB4 475 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 NCDNQ9UBB6 729 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 PNMA8BQ9ULN7 279 aaPredicted RBP21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 COMMD10Q9Y6G5 202 aa21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 TP53BP1Q12888 1972 aaPredicted RBP21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 ZFHX2Q9C0A1 2572 aaPredicted RBP21.59■■□□□ 1.05
PTP4A3-204ENST00000521578 ADAMTS9Q9P2N4 1935 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 EP300Q09472 2414 aaPredicted RBP21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 CCDC189A1A4V9 331 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 MTHFD2P13995 350 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 PKMP14618 531 aaKnown RBP21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 KELP23276 732 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 GRIK2Q13002 908 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 PLA2G2CQ5R387 149 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 SLC23A3Q6PIS1 610 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 PAQR3Q6TCH7 311 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 CHSY3Q70JA7 882 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 ADGRG6Q86SQ4 1221 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 STMN2Q93045 179 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 PANX3Q96QZ0 392 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 COPS8Q99627 209 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 MRGBPQ9NV56 204 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 ZDHHC3Q9NYG2 299 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 STOML1Q9UBI4 398 aa21.58■■□□□ 1.05
PTP4A3-204ENST00000521578 H0Y3Z8 333 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 UBFD1O14562 309 aaKnown RBP21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 SCAMP1O15126 338 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 KERAO60938 352 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 KRT36O76013 467 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 CEACAM5P06731 702 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 MSH3P20585 1137 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 TMEM115Q12893 351 aaPredicted RBP21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 CUL3Q13618 768 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 NXNQ6DKJ4 435 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 RIPOR1Q6ZS17 1223 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 RD3Q7Z3Z2 195 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 RAB44Q7Z6P3 723 aaPredicted RBP21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 NKAPQ8N5F7 415 aaKnown RBP21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 STAG3L4Q8TBR4 150 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 PDXPQ96GD0 296 aa21.58■■□□□ 1.04
PTP4A3-204ENST00000521578 BOCQ9BWV1 1114 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms