RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 DNASE1P24855 282 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 EEF1DP29692 281 aaKnown RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 HOXC8P31273 242 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 CSE1LP55060 971 aaKnown RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 LINC01547P58512 204 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 LGALS3BPQ08380 585 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 RASA2Q15283 850 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 CCDC92Q53HC0 331 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 FAM133BQ5BKY9 247 aaKnown RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 ARMC4Q5T2S8 1044 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 KRT80Q6KB66 452 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 PRR27Q6MZM9 219 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 CEACAM20Q6UY09 585 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 RBMS3Q6XE24 437 aaKnown RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 Q6ZTC4 211 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 PLPPR4Q7Z2D5 763 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 TRPT1Q86TN4 253 aaKnown RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 NUDT13Q86X67 352 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 FAM114A1Q8IWE2 563 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 CNBD1Q8NA66 436 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 XXYLT1Q8NBI6 393 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 TRIM58Q8NG06 486 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 OR10V1Q8NGI7 309 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 OR1J1Q8NGS3 322 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 FGFBP3Q8TAT2 258 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 GRAPLQ8TC17 118 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 CCDC107Q8WV48 283 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 ZFAND2BQ8WV99 257 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 TEKT4Q8WW24 435 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 IRGQQ8WZA9 623 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 NXNL1Q96CM4 212 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 ERP27Q96DN0 273 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 SPDL1Q96EA4 605 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 SFXN2Q96NB2 322 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 LRRC3BQ96PB8 259 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 DUX3Q96PT4 197 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 BICC1Q9H694 974 aaKnown RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 PELI2Q9HAT8 420 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 SERINC1Q9NRX5 453 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 PTTG2Q9NZH5 202 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 LRWD1Q9UFC0 647 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 TUBE1Q9UJT0 475 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 MTUS1Q9ULD2 1270 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 A0A1W2PPQ1 181 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 FAM170AA1A519 330 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 DUXAA6NLW8 204 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 A8MXE2 369 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 ERVV-2B6SEH9 535 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 BLOC1S5-TXNDC5H3BN57 136 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 HMMRO75330 724 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 PRKRAO75569 313 aaKnown RBP3.38□□□□□ -1.87
VPS13B-207ENST00000518569 PSMD10O75832 226 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 FAM200BP0CF97 657 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 ERVK-10P10266 1014 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 PCGF2P35227 344 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 RAB28P51157 221 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 PDX1P52945 283 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 LIMK1P53667 647 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 TPD52P55327 224 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-207ENST00000518569 TUBB4BP68371 445 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 CCDC6Q16204 474 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 LETM2Q2VYF4 491 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 CST9LP1Q5W188 147 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 CORO6Q6QEF8 472 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 RBPMS2Q6ZRY4 209 aaKnown RBP3.38□□□□□ -1.87
VPS13B-207ENST00000518569 IQCHQ86VS3 1027 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 ZSCAN30Q86W11 494 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 ARHGAP24Q8N264 748 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 OR13J1Q8NGT2 312 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 GRHL3Q8TE85 626 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 PSD2Q9BQI7 771 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 RHNO1Q9BSD3 238 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 CENPOQ9BU64 300 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 TBC1D17Q9HA65 648 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 C2orf42Q9NWW7 574 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 CWC25Q9NXE8 425 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-207ENST00000518569 SPHK1Q9NYA1 384 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 FLRT3Q9NZU0 649 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 B3GAT1Q9P2W7 334 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 SLC24A2Q9UI40 661 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 ZDHHC2Q9UIJ5 367 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 ZHX1Q9UKY1 873 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-207ENST00000518569 ABT1Q9ULW3 272 aaKnown RBP3.38□□□□□ -1.87
VPS13B-207ENST00000518569 CCL27Q9Y4X3 112 aa3.38□□□□□ -1.87
VPS13B-207ENST00000518569 DOCK7Q96N67 2140 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 NEMP2A6NFY4 417 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 PTGESO14684 152 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 MEIS2O14770 477 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 SLC22A2O15244 555 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 CLIC2O15247 247 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 LINC01565O15544 149 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 CIDEAO60543 219 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 TBX10O75333 385 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 C22orf31O95567 290 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 IGHV2-70P01814 119 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 FYNP06241 537 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 PLA2G4BP0C869 781 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 EFNA1P20827 205 aaPredicted RBP3.37□□□□□ -1.87
VPS13B-207ENST00000518569 ITGA3P26006 1051 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 ANP32AP39687 249 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms