RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 FOXN2P32314 431 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 CBSP35520 551 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 SNX1Q13596 522 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 P3H1Q32P28 736 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 C1orf189Q5VU69 101 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 MLIPQ5VWP3 458 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 SPESP1Q6UW49 350 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 FAM198BQ6UWH4 519 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 SYCE1Q8N0S2 351 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 C2orf73Q8N5S3 287 aaPredicted RBP16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 SPC24Q8NBT2 197 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 C1orf54Q8WWF1 131 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 N4BP2L2Q92802 583 aaPredicted RBP16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 CIDEBQ9UHD4 219 aa16.73■□□□□ 0.27
CTNNA1-206ENST00000517980 SHANK1Q9Y566 2161 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 SLC5A10A0PJK1 596 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 LIN7AO14910 233 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 ZNF189O75820 626 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 TMEM63AO94886 807 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 GOT2P00505 430 aaKnown RBP16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 IFNB1P01574 187 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 CHRM5P08912 532 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 PSMA3P25788 255 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 UQCRFS1P47985 274 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 CD97P48960 835 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 FOXL2P58012 376 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 RAPSNQ13702 412 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 ITIH4Q14624 930 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 LINC00523Q86TU6 105 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 ATCAYQ86WG3 371 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 TMEM151BQ8IW70 566 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 FDCSPQ8NFU4 85 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 OR13J1Q8NGT2 312 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 HES6Q96HZ4 224 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 MLXIPLQ9NP71 852 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 LUZP4Q9P127 313 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 KLHL20Q9Y2M5 609 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 CAPN6Q9Y6Q1 641 aa16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 SPTAN1Q13813 2472 aaKnown RBP16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 UTP20O75691 2785 aaKnown RBP16.72■□□□□ 0.27
CTNNA1-206ENST00000517980 PRRC2CQ9Y520 2896 aaKnown RBP16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 CLEC18AA5D8T8 446 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 IQCF5A8MTL0 148 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 ISM1B1AKI9 464 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 FTH1P02794 183 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 OR56A5P0C7T3 313 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 MSL3P1P0C860 447 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 AGXTP21549 392 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 GNLYP22749 145 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 OTX2P32243 289 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 CDH17Q12864 832 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 TSTD2Q5T7W7 516 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 CLEC18BQ6UXF7 455 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 PPP1R21Q6ZMI0 780 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 LDB1Q86U70 411 aaPredicted RBP16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 VRK3Q8IV63 474 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 TBC1D21Q8IYX1 336 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 GPR135Q8IZ08 494 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 C19orf47Q8N9M1 422 aaKnown RBP16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 CLEC18CQ8NCF0 446 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 OR6P1Q8NGX9 317 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 CFAP61Q8NHU2 1237 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 FLVCR1-AS1Q8TAF5 88 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 CPT1CQ8TCG5 803 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 NUDT9Q9BW91 350 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 ZNF148Q9UQR1 794 aa16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 PCDHGA9Q9Y5G4 932 aaKnown RBP16.71■□□□□ 0.27
CTNNA1-206ENST00000517980 SPTBN1Q01082 2364 aaKnown RBP16.71■□□□□ 0.26
CTNNA1-206ENST00000517980 ICE1Q9Y2F5 2266 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 MASP2O00187 686 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 LIASO43766 372 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 OR2B3O76000 313 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 GSTM1P09488 218 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 ZSCAN5DPP0CG00 497 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 PEBP1P30086 187 aaKnown RBP16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 STIP1P31948 543 aaKnown RBP16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 CCR7P32248 378 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 SHMT2P34897 504 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 GSTM4Q03013 218 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 ATP1A4Q13733 1029 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 SEMA3AQ14563 771 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 SLC9A5Q14940 896 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 NCF4Q15080 339 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 KCTD19Q17RG1 926 aaPredicted RBP16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 SYTL3Q4VX76 610 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 ZNF385CQ66K41 422 aaPredicted RBP16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 PACS1Q6VY07 963 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 FAM26EQ8N5C1 309 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 ZNF655Q8N720 491 aaPredicted RBP16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 GLIS1Q8NBF1 620 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 OR5K2Q8NHB8 316 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 TCTN2Q96GX1 697 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 DHCR7Q9UBM7 475 aaKnown RBP16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 POLG2Q9UHN1 485 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 PCM1Q15154 2024 aa16.7■□□□□ 0.26
CTNNA1-206ENST00000517980 HEATR9A2RTY3 570 aa16.69■□□□□ 0.26
CTNNA1-206ENST00000517980 BLACEA4D250 179 aa16.69■□□□□ 0.26
CTNNA1-206ENST00000517980 C9J4A7 227 aa16.69■□□□□ 0.26
CTNNA1-206ENST00000517980 E7EVH7 732 aa16.69■□□□□ 0.26
CTNNA1-206ENST00000517980 H3BMH7 237 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms