RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ITIH5Q86UX2 942 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 WDR36Q8NI36 951 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 C3orf30Q96M34 536 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PARK7Q99497 189 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 RNF38Q9H0F5 515 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ASB8Q9H765 288 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 H2AFY2Q9P0M6 372 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 AGO1Q9UL18 857 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 OGDHLQ9ULD0 1010 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 VPS4AQ9UN37 437 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 FPGTO14772 594 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 STK16O75716 305 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 LRATO95237 230 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PRKCGP05129 697 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PGRP06401 933 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ABCB1P08183 1280 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 IQCF3P0C7M6 154 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 OR56A5P0C7T3 313 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CRATP43155 626 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 IST1P53990 364 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CACNG1Q06432 222 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 OXA1LQ15070 435 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PM20D1Q6GTS8 502 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PNCKQ6P2M8 343 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 MZT2AQ6P582 158 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 TTC23LQ6PF05 361 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 DOK6Q6PKX4 331 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PTRH1Q86Y79 214 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CSGALNACT1Q8TDX6 532 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ELMO1Q92556 727 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 OTULINQ96BN8 352 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF486Q96H40 463 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 LRCH3Q96II8 777 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 DMRTB1Q96MA1 342 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ZFP42Q96MM3 310 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CDK15Q96Q40 435 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 RABL2BQ9UNT1 228 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 GRIP1Q9Y3R0 1128 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PCDHGB3Q9Y5G1 929 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PCDHGA8Q9Y5G5 932 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 GPR45Q9Y5Y3 372 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 TTC24A2A3L6 582 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ENPP3O14638 875 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CNTN5O94779 1100 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ALPLP05186 524 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 MYCLP1P12525 358 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 MZF1P28698 734 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 RYKP34925 604 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 IRF8Q02556 426 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 DPY19L1Q2PZI1 675 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 KLHL12Q53G59 568 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF831Q5JPB2 1677 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 TYW3Q6IPR3 259 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CCBE1Q6UXH8 406 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 GALNT12Q8IXK2 581 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 DTWD1Q8N5C7 304 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CAMKK1Q8N5S9 505 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 SPATA17Q96L03 361 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 COL21A1Q96P44 957 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 SLC22A4Q9H015 551 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 HDHD2Q9H0R4 259 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CLEC4MQ9H2X3 399 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 SMOC2Q9H3U7 446 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 MAP10Q9P2G4 905 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 INTS6Q9UL03 887 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PRG3Q9Y2Y8 225 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 KCTD3Q9Y597 815 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 LRRC14BA6NHZ5 514 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ACOX3O15254 700 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 BEST1O76090 585 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 EPOP01588 193 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 IRF1P10914 325 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ANXA8P13928 327 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CD72P21854 359 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SHMT2P34897 504 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 MAPK9P45984 424 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ARCN1P48444 511 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 MLLT6P55198 1093 aaPredicted RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 NCS1P62166 190 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 EN1Q05925 392 aaPredicted RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ABRQ12979 859 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SLC13A2Q13183 592 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CDK5R2Q13319 367 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SEMA3AQ14563 771 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 OR4D1Q15615 310 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DGKKQ5KSL6 1271 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 GPR153Q6NV75 609 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 FAM92BQ6ZTR7 304 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 PRSS48Q7RTY5 328 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 UBE2Q1Q7Z7E8 422 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 MMAAQ8IVH4 418 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SLC7A5P1Q8MH63 180 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 TCAIMQ8N3R3 496 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 NDNFQ8TB73 568 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 C8orf48Q96LL4 319 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 KCNS3Q9BQ31 491 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SLC30A2Q9BRI3 323 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 WDR6Q9NNW5 1121 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 FAM105AQ9NUU6 356 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms