RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 WSB2Q9NYS7 404 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 ABI3Q9P2A4 366 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 TRHDEQ9UKU6 1024 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 KMT2EQ8IZD2 1858 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 MTCL1Q9Y4B5 1905 aaKnown RBP-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 VWDEQ8N2E2 1590 aa-1.25□□□□□ -2.61
RNU6-539P-201ENST00000516665 TRAV9-2A0A087WT02 112 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 PRSS46E5RG02 174 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 H3BML4 177 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 ICOSLGO75144 302 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 MED6O75586 246 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 CEACAM4O75871 244 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 VTNP04004 478 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 CRISP2P16562 243 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 CKMT2P17540 419 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 EDN2P20800 178 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 JAK1P23458 1154 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 GABRB3P28472 473 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 PCP4P48539 62 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 MNAT1P51948 309 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 MVDP53602 400 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 IRX4P78413 519 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 BYSLQ13895 437 aaKnown RBP-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 TGIF1Q15583 401 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 TMEM44Q2T9K0 475 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 GGNBP1Q5YKI7 109 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 NOTUMQ6P988 496 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 CCDC174Q6PII3 467 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 CORO6Q6QEF8 472 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 LINGO2Q7L985 606 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 OR1J1Q8NGS3 322 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 ARRDC3Q96B67 414 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 FBXL8Q96CD0 374 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 LRRC58Q96CX6 371 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 NSL1Q96IY1 281 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 PUS7LQ9H0K6 701 aaKnown RBP-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 SGK2Q9HBY8 427 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 SEPSECSQ9HD40 501 aaKnown RBP-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 ACKR4Q9NPB9 350 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 PKD2L2Q9NZM6 624 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 KIAA1456Q9P272 454 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 FRMD4AQ9P2Q2 1039 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 OPN4Q9UHM6 478 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 DTNAQ9Y4J8 743 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 CACNA1EQ15878 2313 aa-1.26□□□□□ -2.61
RNU6-539P-201ENST00000516665 TEX22C9J3V5 150 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 NPIPB9F8W1W9 429 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 STX16-NPEPL1H3BU86 382 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 FRS3O43559 492 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 DFFBO76075 338 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 BMP10O95393 424 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 GCNT3O95395 438 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 PRAMEF12O95522 483 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 IGKV1-16P04430 117 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 ANXA6P08133 673 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 RBMY1A1P0DJD3 496 aaKnown RBP-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 RBMY1CP0DJD4 496 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 RNH1P13489 461 aaKnown RBP-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 CA4P22748 312 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 RXRGP48443 463 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 CACNG7P62955 275 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 GRIK3Q13003 919 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 SLAQ13239 276 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 RBMY1FQ15415 496 aaKnown RBP-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 PRR4Q16378 134 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF674Q2M3X9 581 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 SLC25A53Q5H9E4 307 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 KLC3Q6P597 504 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 TMEM207Q6UWW9 146 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 SCARA5Q6ZMJ2 495 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 GHDCQ8N2G8 530 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 ARRDC1Q8N5I2 433 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 GPRC5AQ8NFJ5 357 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 FBXO30Q8TB52 745 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 SPPL2AQ8TCT8 520 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 SLC2A12Q8TD20 617 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 WDR60Q8WVS4 1066 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 EXOC4Q96A65 974 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 FAF2Q96CS3 445 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 C8orf37Q96NL8 207 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 SPIN2AQ99865 258 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 SPAG8Q99932 426 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 SPIN2BQ9BPZ2 258 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF649Q9BS31 505 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 B3GNT5Q9BYG0 378 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 CCDC8Q9H0W5 538 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 TRIM45Q9H8W5 580 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 PCDH12Q9NPG4 1184 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 SLC6A13Q9NSD5 602 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 DDX56Q9NY93 547 aaKnown RBP-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 ARMCX1Q9P291 453 aa-1.27□□□□□ -2.61
RNU6-539P-201ENST00000516665 ICE1Q9Y2F5 2266 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 TNRQ92752 1358 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZSCAN5CA6NGD5 496 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 CLCA1A8K7I4 914 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 ARHGEF33A8MVX0 844 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 WWP2O00308 870 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 BCAT2O15382 392 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 MSH4O15457 936 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 SEMA4FO95754 770 aa-1.28□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms