RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.87□□□□□ -0.67
SCARNA16.1-201ENST00000516133 FAM169AQ9Y6X4 670 aa10.87□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ATMQ13315 3056 aa10.87□□□□□ -0.67
SCARNA16.1-201ENST00000516133 FASNP49327 2511 aaKnown RBP10.87□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CFAP46Q8IYW2 2715 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 PIPSLA2A3N6 862 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SLC9B1P1A6NJY1 282 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ERVH48-1M5A8F1 160 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 TK2O00142 265 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 BTN3A1O00481 513 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SPAG6O75602 509 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 S1PR4O95977 384 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 MT-ND3P03897 115 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CCNYL3P0C7X3 344 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 MSL3P1P0C860 447 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 PKMP14618 531 aaKnown RBP10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CHRM3P20309 590 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ETF1P62495 437 aaKnown RBP10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 KCNAB1Q14722 419 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 MORF4L2Q15014 288 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 IZUMO3Q5VZ72 239 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ZNF470Q6ECI4 717 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 C6orf15Q6UXA7 325 aaPredicted RBP10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 UNC5AQ6ZN44 842 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CENPUQ71F23 418 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 TIPARPQ7Z3E1 657 aaKnown RBP10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 VASH2Q86V25 355 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 VRK3Q8IV63 474 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 PDIK1LQ8N165 341 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CFAP61Q8NHU2 1237 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ELMO2Q96JJ3 720 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 FOPNLQ96NB1 174 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 EBNA1BP2Q99848 306 aaKnown RBP10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CCDC68Q9H2F9 335 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 XKR8Q9H6D3 395 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 LATS2Q9NRM7 1088 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 C20orf96Q9NUD7 363 aaPredicted RBP10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SOHLH2Q9NX45 425 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ACTR10Q9NZ32 417 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 KLHL42Q9P2K6 505 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ICKQ9UPZ9 632 aa10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SMG1Q96Q15 3661 aaKnown RBP10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 TLN1Q9Y490 2541 aaKnown RBP10.86□□□□□ -0.67
SCARNA16.1-201ENST00000516133 EIF4E1BA6NMX2 242 aaKnown RBP10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 E5RI56 91 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 NDC80O14777 642 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ATXN7O15265 892 aaPredicted RBP10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 DLGAP3O95886 979 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ITGB2P05107 769 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CHRM5P08912 532 aaPredicted RBP10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 EBLN1P0CF75 366 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 PGAM1P18669 254 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CD9P21926 228 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ATP5DP30049 168 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CASQ1P31415 396 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CCNFP41002 786 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 RAB28P51157 221 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CTBP1Q13363 440 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 KIR2DS3Q14952 304 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SOWAHCQ53LP3 525 aaPredicted RBP10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 CTSL3PQ5NE16 218 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SPESP1Q6UW49 350 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 DCUN1D3Q8IWE4 304 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 AGGF1Q8N302 714 aaeCLIP10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 RAB42Q8N4Z0 105 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 LKAAEAR1Q8TD35 194 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 MAGEC3Q8TD91 643 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SKA2Q8WVK7 121 aaPredicted RBP10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 RAD51AP1Q96B01 352 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SLC22A18Q96BI1 424 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 LRRC39Q96DD0 335 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 TRIM56Q9BRZ2 755 aaKnown RBP10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 FAM167BQ9BTA0 163 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 GPN2Q9H9Y4 310 aaPredicted RBP10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 FANCEQ9HB96 536 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 LNPEPQ9UIQ6 1025 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SERTAD3Q9UJW9 196 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 PADI1Q9ULC6 663 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 PCDHGA4Q9Y5G9 962 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 COMMD10Q9Y6G5 202 aa10.85□□□□□ -0.67
SCARNA16.1-201ENST00000516133 TTI1O43156 1089 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 NIPSNAP2O75323 286 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 KIAA0754O94854 1291 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 TPBGLP0DKB5 382 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 LIFP15018 202 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ST6GAL1P15907 406 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 ZNF28P17035 718 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 STAT5AP42229 794 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 MC1RQ01726 317 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 DHX9Q08211 1270 aaKnown RBP10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SRSF6Q13247 344 aaKnown RBP10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 KYNUQ16719 465 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 TTLL9Q3SXZ7 439 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 BBS9Q3SYG4 887 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 TAF1BQ53T94 588 aaPredicted RBP10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 HSP90AA5PQ58FG0 334 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 SPANXN3Q5MJ09 141 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 PWWP2BQ6NUJ5 590 aa10.84□□□□□ -0.67
SCARNA16.1-201ENST00000516133 FBXO38Q6PIJ6 1188 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms