RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	TRIM65	Q6PJ69	517 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	MTSS1L	Q765P7	747 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	DGLUCY	Q7Z3D6	616 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	TADA2B	Q86TJ2	420 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	HERC6	Q8IVU3	1022 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	FOXRED2	Q8IWF2	684 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	CHERP	Q8IWX8	916 aa	Known RBP	4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	BLID	Q8IZY5	108 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF713	Q8N859	430 aa	Predicted RBP	4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	SLC24A4	Q8NFF2	622 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	MAGEC3	Q8TD91	643 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	LRRC15	Q8TF66	581 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	TAF15	Q92804	592 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	DHX58	Q96C10	678 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	DYNLL2	Q96FJ2	89 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	SLC39A13	Q96H72	371 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	C12orf42	Q96LP6	360 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF583	Q96ND8	569 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCSER1	Q9C0I3	900 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZMYND12	Q9H0C1	365 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	ESRP2	Q9H6T0	727 aa	Known RBP	4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	KAT14	Q9H8E8	782 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	MAGEF1	Q9HAY2	307 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	BARHL2	Q9NY43	387 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	KIAA1456	Q9P272	454 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	ADD3	Q9UEY8	706 aa	Known RBP	4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	AMDHD2	Q9Y303	409 aa		4.27	□□□□□ -1.73
RUFY3-215	ENST00000515479	C5orf42	Q9H799	3197 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	BAHCC1	Q9P281	2608 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	MCM3AP	O60318	1980 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	PKD1L2	Q7Z442	2459 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	GOLGA6L9	A6NEM1	432 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	ERI2	A8K979	691 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	VGLL3	A8MV65	326 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	KLRC4	O43908	158 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	STX10	O60499	249 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	DUSP11	O75319	330 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	BAIAP3	O94812	1187 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	ASGR1	P07306	291 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	CYC1	P08574	325 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	TSPY3	P0CV98	308 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	TSPY8	P0CW00	308 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	TOP1	P11387	765 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	IL9	P15248	144 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	ITGA2	P17301	1181 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	CASP1	P29466	404 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	CBX1	P83916	185 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	TFAP4	Q01664	338 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	GRIK3	Q13003	919 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	COG2	Q14746	738 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	KRT72	Q14CN4	511 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	FCN2	Q15485	313 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	SPECC1L	Q69YQ0	1117 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	TAOK1	Q7L7X3	1001 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	KMT5C	Q86Y97	462 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	PDILT	Q8N807	584 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	LSM14A	Q8ND56	463 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	PRSS33	Q8NF86	280 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	KIF18A	Q8NI77	898 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	DUSP19	Q8WTR2	217 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	ALG14	Q96F25	216 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCDC34	Q96HJ3	373 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	PANX2	Q96RD6	677 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	TMEM47	Q9BQJ4	181 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	LZTS2	Q9BRK4	669 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	EGLN1	Q9GZT9	426 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	GFRA4	Q9GZZ7	299 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	SPATC1L	Q9H0A9	340 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	CUEDC2	Q9H467	287 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	SAMSN1	Q9NSI8	373 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	CGN	Q9P2M7	1197 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	LIMA1	Q9UHB6	759 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF215	Q9UL58	517 aa	Predicted RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	PADI1	Q9ULC6	663 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	PPP2R2C	Q9Y2T4	447 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	MMP24	Q9Y5R2	645 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	STON1	Q9Y6Q2	735 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	PDCD11	Q14690	1871 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	TANC1	Q9C0D5	1861 aa		4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	RIF1	Q5UIP0	2472 aa	Known RBP	4.26	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCDC194	A0A1B0GVG4	234 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	TMEM221	A6NGB7	291 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	LILRA5	A6NI73	299 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479		M0R296	226 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	DVL1	O14640	695 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	SLU7	O95391	586 aa	Known RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	TBX6	O95947	436 aa	Predicted RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	GYPC	P04921	128 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	OR52Z1	P0C646	297 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	PDHB	P11177	359 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	H2AFX	P16104	143 aa	Predicted RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	CD53	P19397	219 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	AGA	P20933	346 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	GRK6	P43250	576 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms