RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZYG11AQ6WRX3 759 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 SNX20Q7Z614 316 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 COMTD1Q86VU5 262 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ARID3BQ8IVW6 561 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 DMRTC2Q8IXT2 367 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ELP4Q96EB1 424 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF512Q96ME7 567 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 VRK1Q99986 396 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 WDR12Q9GZL7 423 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 RACGAP1Q9H0H5 632 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 LRRC4Q9HBW1 653 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CPNE5Q9HCH3 593 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CSNK1G1Q9HCP0 422 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 XPNPEP3Q9NQH7 507 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 WWOXQ9NZC7 414 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 FBXW11Q9UKB1 542 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ST3GAL5Q9UNP4 418 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 SNX10Q9Y5X0 201 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 TTC3P53804 2025 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 VWA8A3KMH1 1905 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ARL5CA6NH57 179 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 PRR5-ARHGAP8B1AHC4 643 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 TARM1B6A8C7 271 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 KCNK1O00180 336 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 FCHO1O14526 889 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 SNAP91O60641 907 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 PROCP04070 461 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 BMP2P12643 396 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ARRB2P32121 409 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 MAGEA12P43365 314 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 RGS19P49795 217 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 PGDP52209 483 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 NDST2P52849 883 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 EIF4EBP2Q13542 120 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 PCLAFQ15004 111 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 UPP1Q16831 310 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 RABGAP1LQ5R372 815 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 GPR107Q5VW38 600 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 GDF6Q6KF10 455 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ZCCHC12Q6PEW1 402 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 TXNDC11Q6PKC3 985 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CES3Q6UWW8 571 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF438Q7Z4V0 828 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 LINC00523Q86TU6 105 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 HORMAD1Q86X24 394 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CBARPQ8N350 705 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 C10orf53Q8N6V4 93 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 SHKBP1Q8TBC3 707 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 DTD1Q8TEA8 209 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 RIT1Q92963 219 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ISL2Q96A47 359 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 EXOSC8Q96B26 276 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 PKMYT1Q99640 499 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 BARD1Q99728 777 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 TTYH2Q9BSA4 534 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 MED10Q9BTT4 135 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 SUV39H2Q9H5I1 410 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 KCNK4Q9NYG8 393 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 COA4Q9NYJ1 87 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 VSX1Q9NZR4 365 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CCDC59Q9P031 241 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ASH2LQ9UBL3 628 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 MAGED2Q9UNF1 606 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 THSD7BQ9C0I4 1608 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ZCWPW2A0A1B0GU75 182 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ULK1O75385 1050 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CLPXO76031 633 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ANXA6P08133 673 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 GNAO1P09471 354 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 JUPP14923 745 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF182P17025 639 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 OPRL1P41146 370 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 RAD52P43351 418 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 SLC7A2P52569 658 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 BNIP2Q12982 314 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 TUBB3Q13509 450 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 GTDC1Q4AE62 458 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 YIF1BQ5BJH7 314 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 SGO1Q5FBB7 561 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 C1orf185Q5T7R7 199 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 TAF2Q6P1X5 1199 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 C16orf46Q6P387 395 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 SYCE2Q6PIF2 218 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 BRAT1Q6PJG6 821 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 DPPA2Q7Z7J5 298 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 RASAL3Q86YV0 1011 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CCDC103Q8IW40 242 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF619Q8N2I2 560 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 TMEM86AQ8N2M4 240 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 PGBD3Q8N328 593 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CCNYQ8ND76 341 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 Q8NFD4 153 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 KLHL6Q8WZ60 621 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ST8SIA4Q92187 359 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 UFD1Q92890 307 aa7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 USP13Q92995 863 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF419Q96HQ0 510 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 RBM4BQ9BQ04 359 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-219ENST00000514743 CCM2Q9BSQ5 444 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms