RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TRIM4Q9C037 500 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 KLHL25Q9H0H3 589 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 P2RY12Q9H244 342 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 SPHK1Q9NYA1 384 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 OR6C2Q9NZP2 312 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 MARCH4Q9P2E8 410 aaPredicted RBP10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 PPP2R2CQ9Y2T4 447 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 SETXQ7Z333 2677 aaKnown RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 A0A0J9YY10 115 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 H3BMH7 237 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 PRMT5O14744 637 aaPredicted RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 CD3EAPO15446 510 aaKnown RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 CEP104O60308 925 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 KDM1AO60341 852 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 GPC4O75487 556 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 RFPL1O75677 317 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 WISP1O95388 367 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 RAB40ALP0C0E4 278 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 CYP2A7P20853 494 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 RPS3P23396 243 aaKnown RBP eCLIP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 ARNTP27540 789 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 PEBP1P30086 187 aaKnown RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 PKLRP30613 574 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 CXCR5P32302 372 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 GABRA4P48169 554 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 TTPAP49638 278 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 ITGA1P56199 1179 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 RPS15P62841 145 aaKnown RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 CDK16Q00536 496 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 IL10RAQ13651 578 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 KCNJ11Q14654 390 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 ZIC1Q15915 447 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 LACTB2Q53H82 288 aaPredicted RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 PLEKHS1Q5SXH7 462 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 LCN10Q6JVE6 187 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 LRRC8BQ6P9F7 803 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 FAM198BQ6UWH4 519 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 GSTA5Q7RTV2 222 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 LDB1Q86U70 411 aaPredicted RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 TRIM73Q86UV7 250 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 PTRH1Q86Y79 214 aaKnown RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 APLFQ8IW19 511 aaPredicted RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 MPP5Q8N3R9 675 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 PRELID2Q8N945 189 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 MR1Q95460 341 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 MENTQ9BUN1 341 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 KIFC1Q9BW19 673 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 CHRNA10Q9GZZ6 450 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 CHST8Q9H2A9 424 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 MRM3Q9HC36 420 aaKnown RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 HOMER3Q9NSC5 361 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 PCMTD2Q9NV79 361 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 SYBUQ9NX95 663 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 ANAPC5Q9UJX4 755 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 PLAGL1Q9UM63 463 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 MAN2B2Q9Y2E5 1009 aa10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 TDRKHQ9Y2W6 561 aaKnown RBP10.11□□□□□ -0.79
HMGXB3-205ENST00000514469 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 TCRBV7S3A2A0A539 114 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 IQCF5A8MTL0 148 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 E7EQ34 232 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 MKRN2OSH3BPM6 223 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 MEN1O00255 615 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 MAP3K7O43318 606 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 NRDCO43847 1150 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 SLCO2B1O94956 709 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 APOA4P06727 396 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 KLK3P07288 261 aaPredicted RBP10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 CAPN1P07384 714 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 MGAT1P26572 445 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 AOAHP28039 575 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 NMBRP28336 390 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 MAGEA6P43360 314 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 NPY2RP49146 381 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 CSRP3P50461 194 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 RAB28P51157 221 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 CSE1LP55060 971 aaKnown RBP10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 HSPA14Q0VDF9 509 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 GRB7Q14451 532 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 KIR2DS3Q14952 304 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 KYNUQ16719 465 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 SLC5A12Q1EHB4 618 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 DEFB110Q30KQ9 67 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 ARMC3Q5W041 872 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 ZNF385CQ66K41 422 aaPredicted RBP10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 TTC27Q6P3X3 843 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 UNC5DQ6UXZ4 953 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 HOOK3Q86VS8 718 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 LRRC6Q86X45 466 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 DCUN1D3Q8IWE4 304 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 SYTL1Q8IYJ3 562 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 KRT222Q8N1A0 295 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 RASGEF1CQ8N431 466 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 ENDOVQ8N8Q3 282 aaKnown RBP10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 LINC01555Q8NAE3 123 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 ADAMTS17Q8TE56 1095 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 ASZ1Q8WWH4 475 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 THAP4Q8WY91 577 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 CLIP3Q96DZ5 547 aa10.1□□□□□ -0.79
HMGXB3-205ENST00000514469 TCTN2Q96GX1 697 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms