RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 USP13Q92995 863 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 HDAC10Q969S8 669 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TAMM41Q96BW9 452 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TRMT61BQ9BVS5 477 aaKnown RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 KLF16Q9BXK1 252 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 ULBP1Q9BZM6 244 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 MRPL46Q9H2W6 279 aaKnown RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TRIT1Q9H3H1 467 aaKnown RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 LRRC40Q9H9A6 602 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TBC1D23Q9NUY8 699 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SMPD4Q9NXE4 827 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 MTF2Q9Y483 593 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 A0A0G2JMP0 313 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TRPC5OSA6NMA1 111 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 C2CD4DB7Z1M9 353 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 EEF2KO00418 725 aaKnown RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 CLDN5O00501 218 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 AIM2O14862 343 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SYNCRIPO60506 623 aaKnown RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TLR5O60602 858 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TIPRLO75663 272 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 ADH1CP00326 375 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 IGLV3-27P01718 113 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 POLBP06746 335 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SPNP16150 400 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TCN1P20061 433 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SPRP35270 261 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 DMC1Q14565 340 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 FBXO43Q4G163 708 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 DGKKQ5KSL6 1271 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TMEM179BQ7Z7N9 219 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 NKAIN3Q8N8D7 197 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 C12orf29Q8N999 325 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 CSGALNACT1Q8TDX6 532 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 WFIKKN2Q8TEU8 576 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 VOPP1Q96AW1 172 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 FAR2Q96K12 515 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 RILPQ96NA2 401 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 MYADMQ96S97 322 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 ATOH8Q96SQ7 321 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 C9orf16Q9BUW7 83 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 UGT2B28Q9BY64 529 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SEMA6AQ9H2E6 1030 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 ASIC5Q9NY37 505 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 PCDHGA8Q9Y5G5 932 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 PCDHGA10Q9Y5H3 936 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 WASH4PA8MWX3 477 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 H3BQ06 376 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TNFRSF10AO00220 468 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 B4GAT1O43505 415 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 ADRA2AP08913 450 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 EFNA1P20827 205 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 FDXRP22570 491 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 JAK1P23458 1154 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 RCVRNP35243 200 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 MATKP42679 507 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 SLC11A2P49281 568 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 SH3BP2P78314 561 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TEKQ02763 1124 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 SIGLEC14Q08ET2 396 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 RALGDSQ12967 914 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 IL18R1Q13478 541 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 RGS21Q2M5E4 152 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 PLA2G4EQ3MJ16 856 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 Q5BKY6 102 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 DCUN1D2Q6PH85 259 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 ISLR2Q6UXK2 745 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 USP43Q70EL4 1123 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TMEM150AQ86TG1 271 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 CLIP3Q96DZ5 547 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 NSMCE3Q96MG7 304 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TRMOQ9BU70 441 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 SLC25A23Q9BV35 468 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 CHST8Q9H2A9 424 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 HEBP1Q9NRV9 189 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 GPATCH2LQ9NWQ4 482 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 OPTCQ9UBM4 332 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 IKZF3Q9UKT9 509 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TESMINQ9Y4I5 508 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 NUP205Q92621 2012 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 A0A1W2PRU2 124 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 OR2A25A4D2G3 310 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 UBXN8O00124 270 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 SEMA3DO95025 777 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 PAPSS2O95340 614 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 CYBBP04839 570 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 C1SP09871 688 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 CCNA2P20248 432 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 FCARP24071 287 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 RAB10P61026 200 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF783Q6ZMS7 281 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 STRA8Q7Z7C7 330 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 SLC22A15Q8IZD6 547 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 C12orf76Q8N812 135 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 RHEBL1Q8TAI7 183 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 CHTF18Q8WVB6 975 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 RBM18Q96H35 190 aaKnown RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 FCRL1Q96LA6 429 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TEKT5Q96M29 485 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms