RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 FBRSL1Q9HCM7 1045 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 CCNB1IP1Q9NPC3 277 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 PRTFDC1Q9NRG1 225 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 C1orf109Q9NX04 203 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 NENFQ9UMX5 172 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 SAMHD1Q9Y3Z3 626 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 PRAMEF26H0Y7S4 382 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 STX16-NPEPL1H3BU86 382 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 STX16O14662 325 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 LDB2O43679 373 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 AHSA1O95433 338 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 IFNW1P05000 195 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CLUP10909 449 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 HNRNPH3P31942 346 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 ASPAP45381 313 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 GJA8P48165 433 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 USP46P62068 366 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CLCQ05315 142 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 LCP2Q13094 533 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 RCAN2Q14206 197 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ZNF846Q147U1 533 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ZBTB6Q15916 424 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ECM1Q16610 540 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 DLK2Q6UY11 383 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CCDC80Q76M96 950 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 IRF2BP2Q7Z5L9 587 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ADGRD2Q7Z7M1 963 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 OR9A1PQ8NGU1 263 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 MAGEE2Q8TD90 523 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 GDPD5Q8WTR4 605 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 FUT8Q9BYC5 575 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 RNF39Q9H2S5 420 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ADAP2Q9NPF8 381 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ATXN10Q9UBB4 475 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 HAO1Q9UJM8 370 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 KCNK6Q9Y257 313 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 MAP2P11137 1827 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 IL33O95760 270 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ITGA3P26006 1051 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 FAUP35544 74 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 PSME3P61289 254 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 WDR5P61964 334 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 MRPS35P82673 323 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 GBE1Q04446 702 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TDGQ13569 410 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ENPP2Q13822 863 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 PLEKHS1Q5SXH7 462 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ABHD17BQ5VST6 288 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ZNF57Q68EA5 555 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 KIAA0895LQ68EN5 471 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 DHDDSQ86SQ9 333 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CPNE9Q8IYJ1 553 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 SLC22A15Q8IZD6 547 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TDHQ8IZJ6 230 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TRAM1L1Q8N609 369 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 GLIS3Q8NEA6 775 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TEPSINQ96N21 525 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CYP2S1Q96SQ9 504 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TMEM79Q9BSE2 394 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 BTBD10Q9BSF8 475 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TRIM8Q9BZR9 551 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 COMMD4Q9H0A8 199 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 TELO2Q9Y4R8 837 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 A0A1W2PP55 124 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 PRODHO43272 600 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 GJB5O95377 273 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 MNDAP41218 407 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 IDH2P48735 452 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 GATMP50440 423 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 E2F1Q01094 437 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SLBPQ14493 270 aaKnown RBP eCLIP4.16□□□□□ -1.74
VCAN-209ENST00000513016 GRM7Q14831 915 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TERF2Q15554 542 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 IL17AQ16552 155 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SPIN4Q56A73 249 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 LRIF1Q5T3J3 769 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SLC9A4Q6AI14 798 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SLC30A6Q6NXT4 461 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TMPPEQ6ZT21 453 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 VASH1Q7L8A9 365 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 MRPL10Q7Z7H8 261 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 SPOCK2Q92563 424 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 C16orf70Q9BSU1 422 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 MINDY3Q9H8M7 445 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CHMP1AQ9HD42 196 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 CMTM6Q9NX76 183 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SIT1Q9Y3P8 196 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SESN1Q9Y6P5 492 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TBX18O95935 607 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CD2P06729 351 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 DRD4P21917 467 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 HOXC13P31276 330 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 LIMK2P53671 638 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 RAPSNQ13702 412 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ZMYND11Q15326 602 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 DCST1Q5T197 706 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TMEM63BQ5T3F8 832 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TCEAL8Q8IYN2 117 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR8H2Q8N162 312 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms