RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TRIM73Q86UV7 250 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 KMT5CQ86Y97 462 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 MPP5Q8N3R9 675 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 C2orf73Q8N5S3 287 aaPredicted RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 LSM14AQ8ND56 463 aaKnown RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 OR5K2Q8NHB8 316 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 LKAAEAR1Q8TD35 194 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 GRK7Q8WTQ7 553 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 SNRNP27Q8WVK2 155 aaKnown RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 ASZ1Q8WWH4 475 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 STARD8Q92502 1023 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 TTC9Q92623 222 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 PEX13Q92968 403 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 MR1Q95460 341 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 ZNF669Q96BR6 464 aaPredicted RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 CLIP3Q96DZ5 547 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 MFSD3Q96ES6 412 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 SLC41A2Q96JW4 573 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 PANX3Q96QZ0 392 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 TRIM56Q9BRZ2 755 aaKnown RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 EFHD1Q9BUP0 239 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 TUBB2BQ9BVA1 445 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 DDX47Q9H0S4 455 aaKnown RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 TFB2MQ9H5Q4 396 aaKnown RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 TREX1Q9NSU2 369 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 ACTR10Q9NZ32 417 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 ASIC3Q9UHC3 531 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 IL17BQ9UHF5 180 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 POLG2Q9UHN1 485 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 CROTQ9UKG9 612 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 SLC39A10Q9ULF5 831 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 RIMKLBQ9ULI2 386 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 ICKQ9UPZ9 632 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 RUVBL2Q9Y230 463 aaKnown RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 CRYL1Q9Y2S2 319 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 TMEM184BQ9Y519 407 aaPredicted RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 PCDHB3Q9Y5E6 796 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 MRPS18BQ9Y676 258 aaKnown RBP6.31□□□□□ -1.4
KDM3B-208ENST00000512928 SAR1BQ9Y6B6 198 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 SDK2Q58EX2 2172 aa6.31□□□□□ -1.4
KDM3B-208ENST00000512928 HELZ2Q9BYK8 2649 aaKnown RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CFAP46Q8IYW2 2715 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SLC5A10A0PJK1 596 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CDC14CA4D256 554 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SDR42E2A6NKP2 422 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 TMEM150CB9EJG8 249 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CPNE3O75131 537 aaKnown RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 NIPSNAP2O75323 286 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 DLGAP3O95886 979 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 MT-ND3P03897 115 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 F7P08709 466 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CHRM5P08912 532 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 ST6GAL1P15907 406 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 UGT2B7P16662 529 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CHRM3P20309 590 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 IVDP26440 423 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 ACADLP28330 430 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CCR10P46092 362 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 MC1RQ01726 317 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 PLOD1Q02809 727 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CDC20Q12834 499 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 NFATC3Q12968 1075 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 TSTA3Q13630 321 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 DHX34Q14147 1143 aaKnown RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 ERV3-1Q14264 604 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 DEFB110Q30KQ9 67 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 DEFB109BQ30KR1 87 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 ZNF658BQ4V348 819 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 DNAJC21Q5F1R6 531 aaKnown RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 RNF187Q5TA31 235 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 ATP1A1-AS1Q5TC04 95 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 ZNF470Q6ECI4 717 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 FAM199XQ6PEV8 388 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 TTC23LQ6PF05 361 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CNSTQ6PJW8 725 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SPESP1Q6UW49 350 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 PRICKLE2Q7Z3G6 844 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 ZNF605Q86T29 641 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 LRRC6Q86X45 466 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 VRK3Q8IV63 474 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 KLHL7Q8IXQ5 586 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 TBC1D21Q8IYX1 336 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SLC22A15Q8IZD6 547 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 ADGRF3Q8IZF5 1079 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 RAB42Q8N4Z0 105 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CT55Q8WUE5 264 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SEC14L1Q92503 715 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CPT1BQ92523 772 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 MED8Q96G25 268 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SGSM3Q96HU1 749 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SLC45A3Q96JT2 553 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 C16orf45Q96MC5 204 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 FOPNLQ96NB1 174 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SERPINB12Q96P63 405 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 KIFC1Q9BW19 673 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CARD6Q9BX69 1037 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SLC12A9Q9BXP2 914 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 FAM117AQ9C073 453 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 TWSG1Q9GZX9 223 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms