RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CCDC42Q96M95 316 aa8.78□□□□□ -1
NUP54-211ENST00000512151 SNRNP25Q9BV90 132 aaKnown RBP8.78□□□□□ -1
NUP54-211ENST00000512151 SELENOOQ9BVL4 669 aa8.78□□□□□ -1
NUP54-211ENST00000512151 TDRD1Q9BXT4 1180 aaKnown RBP8.78□□□□□ -1
NUP54-211ENST00000512151 PACSIN1Q9BY11 444 aa8.78□□□□□ -1
NUP54-211ENST00000512151 PITPNM3Q9BZ71 974 aa8.78□□□□□ -1
NUP54-211ENST00000512151 TSPAN10Q9H1Z9 355 aaPredicted RBP8.78□□□□□ -1
NUP54-211ENST00000512151 ZFYVE1Q9HBF4 777 aa8.78□□□□□ -1
NUP54-211ENST00000512151 CWC15Q9P013 229 aaKnown RBP8.78□□□□□ -1
NUP54-211ENST00000512151 DNPEPQ9ULA0 475 aa8.78□□□□□ -1
NUP54-211ENST00000512151 EPN1Q9Y6I3 576 aaPredicted RBP8.78□□□□□ -1
NUP54-211ENST00000512151 RCCD1A6NED2 376 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 EIF3CLB5ME19 914 aaKnown RBP8.77□□□□□ -1.01
NUP54-211ENST00000512151 BTN3A3O00478 584 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 POP7O75817 140 aaKnown RBP8.77□□□□□ -1.01
NUP54-211ENST00000512151 OR2B3O76000 313 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 HLA-DPA1P20036 260 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 PRDX3P30048 256 aaKnown RBP8.77□□□□□ -1.01
NUP54-211ENST00000512151 ADSLP30566 484 aaPredicted RBP8.77□□□□□ -1.01
NUP54-211ENST00000512151 CTSCP53634 463 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 DMPKQ09013 629 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 NIPAL4Q0D2K0 466 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 PCOLCEQ15113 449 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 ANKRD20A8PQ5CZ79 823 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 MARC1Q5VT66 337 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 CCDC170Q8IYT3 715 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 MCOLN2Q8IZK6 566 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 TRAM1L1Q8N609 369 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 TEX26Q8N6G2 289 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 ZNF655Q8N720 491 aaPredicted RBP8.77□□□□□ -1.01
NUP54-211ENST00000512151 C3orf20Q8ND61 904 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 ACRBPQ8NEB7 543 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 ARRDC2Q8TBH0 407 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 PROKR1Q8TCW9 393 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 AGAP11Q8TF27 550 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 CA5BP1Q8WTZ4 195 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 HAS2Q92819 552 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 MCEEQ96PE7 176 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 ALPK1Q96QP1 1244 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 EIF3CQ99613 913 aaKnown RBP8.77□□□□□ -1.01
NUP54-211ENST00000512151 SPSB2Q99619 263 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 CNPY3Q9BT09 278 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 AP1M1Q9BXS5 423 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 UCK2Q9BZX2 261 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 WWP1Q9H0M0 922 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 DEF6Q9H4E7 631 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 KIR3DX1Q9H7L2 352 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 DNAJB12Q9NXW2 375 aaKnown RBP8.77□□□□□ -1.01
NUP54-211ENST00000512151 PTGFRNQ9P2B2 879 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 PCSK1NQ9UHG2 260 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 BOLA1Q9Y3E2 137 aa8.77□□□□□ -1.01
NUP54-211ENST00000512151 CPAMD8Q8IZJ3 1885 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 DYTNA2CJ06 578 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 GSAPA4D1B5 854 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 BTN3A1O00481 513 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 TOXO94900 526 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 WDPCPO95876 746 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 CELA2AP08217 269 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 CD63P08962 238 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 PIRTP0C851 137 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 AMPD1P23109 780 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 MSX1P28360 303 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 MAGEA1P43355 309 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 NSFP46459 744 aaKnown RBP8.76□□□□□ -1.01
NUP54-211ENST00000512151 ITKQ08881 620 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 TMEM115Q12893 351 aaPredicted RBP8.76□□□□□ -1.01
NUP54-211ENST00000512151 XRCC4Q13426 336 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 PPP6R3Q5H9R7 873 aaPredicted RBP8.76□□□□□ -1.01
NUP54-211ENST00000512151 PPP1R15BQ5SWA1 713 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 COX15Q7KZN9 410 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 FGD2Q7Z6J4 655 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 TRIM73Q86UV7 250 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 AMZ2Q86W34 360 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 DOLPP1Q86YN1 238 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 KRTAP1-3Q8IUG1 177 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 GPR135Q8IZ08 494 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 SIRT6Q8N6T7 355 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 BRIX1Q8TDN6 353 aaKnown RBP8.76□□□□□ -1.01
NUP54-211ENST00000512151 PHF10Q8WUB8 498 aaKnown RBP8.76□□□□□ -1.01
NUP54-211ENST00000512151 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.76□□□□□ -1.01
NUP54-211ENST00000512151 ZFPM2Q8WW38 1151 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 NACC2Q96BF6 587 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 ZNF653Q96CK0 615 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 C12orf66Q96MD2 445 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 GPR137Q96N19 417 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 DESI2Q9BSY9 194 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 ZSCAN5AQ9BUG6 496 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.76□□□□□ -1.017e-10■■■■■ 34.7
NUP54-211ENST00000512151 THAP2Q9H0W7 228 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 SOX17Q9H6I2 414 aaPredicted RBP8.76□□□□□ -1.01
NUP54-211ENST00000512151 PCDH9Q9HC56 1237 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 ZNF160Q9HCG1 818 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 ADAM22Q9P0K1 906 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 KCNN3Q9UGI6 736 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 PCDHA13Q9Y5I0 950 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 MXRA5Q9NR99 2828 aa8.76□□□□□ -1.01
NUP54-211ENST00000512151 HRNRQ86YZ3 2850 aaPredicted RBP8.75□□□□□ -1.01
NUP54-211ENST00000512151 FAM90A27PA6NNH2 459 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 FOXO6A8MYZ6 492 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 ZSCAN9O15535 394 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms