RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 C17orf53Q8N3J3 647 aaPredicted RBP12.87□□□□□ -0.35
RNF4-215ENST00000511843 ZNF843Q8N446 348 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 ESX1Q8N693 406 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 NAT8LQ8N9F0 302 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 MCUQ8NE86 351 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 LPGAT1Q92604 370 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 ZNF501Q96CX3 271 aaPredicted RBP12.87□□□□□ -0.35
RNF4-215ENST00000511843 BIRC8Q96P09 236 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 IL17FQ96PD4 163 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 TSSK1BQ9BXA7 367 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 PITPNM3Q9BZ71 974 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 C1GALT1Q9NS00 363 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 GALPQ9UBC7 116 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 ASIC3Q9UHC3 531 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 GNPTGQ9UJJ9 305 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 BTRCQ9Y297 605 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 NFS1Q9Y697 457 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 MAD1L1Q9Y6D9 718 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 ANKRD12Q6UB98 2062 aa12.87□□□□□ -0.35
RNF4-215ENST00000511843 SDR42E2A6NKP2 422 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 TMEM150CB9EJG8 249 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 F8W8V4 182 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 HCRTR1O43613 425 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 TCP1P17987 556 aaKnown RBP12.86□□□□□ -0.35
RNF4-215ENST00000511843 RPS3P23396 243 aaKnown RBP eCLIP12.86□□□□□ -0.35
RNF4-215ENST00000511843 OAS2P29728 719 aaKnown RBP12.86□□□□□ -0.35
RNF4-215ENST00000511843 SHMT2P34897 504 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 MAGEA3P43357 314 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 BDKRB1P46663 353 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 TUBB4BP68371 445 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 TUBB2AQ13885 445 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 DHX34Q14147 1143 aaKnown RBP12.86□□□□□ -0.35
RNF4-215ENST00000511843 TMED2Q15363 201 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 ZIC1Q15915 447 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 TYSND1Q2T9J0 566 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 DEFB110Q30KQ9 67 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 CCSMST1Q4G0I0 132 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 TMTC4Q5T4D3 741 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 RNASEH2BQ5TBB1 312 aaKnown RBP12.86□□□□□ -0.35
RNF4-215ENST00000511843 ZNF470Q6ECI4 717 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 MRNIPQ6NTE8 343 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 C16orf46Q6P387 395 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 SPESP1Q6UW49 350 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 CENPUQ71F23 418 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 TMEM126BQ8IUX1 230 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 KLHL7Q8IXQ5 586 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 PPIL6Q8IXY8 311 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 FLVCR1-AS1Q8TAF5 88 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 GRK7Q8WTQ7 553 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 CT55Q8WUE5 264 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 SKA2Q8WVK7 121 aaPredicted RBP12.86□□□□□ -0.35
RNF4-215ENST00000511843 ASZ1Q8WWH4 475 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 STARD8Q92502 1023 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 SLC45A3Q96JT2 553 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 TRAPPC9Q96Q05 1148 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 OR2A14Q96R47 310 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 ARHGAP9Q9BRR9 750 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 TUBB2BQ9BVA1 445 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 XAB2Q9HCS7 855 aaKnown RBP12.86□□□□□ -0.35
RNF4-215ENST00000511843 POLG2Q9UHN1 485 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 KLHL20Q9Y2M5 609 aa12.86□□□□□ -0.35
RNF4-215ENST00000511843 ZCWPW2A0A1B0GU75 182 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 FAM237BA0A1B0GVD1 139 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 ZNF891A8MT65 544 aaPredicted RBP12.85□□□□□ -0.35
RNF4-215ENST00000511843 TK2O00142 265 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 MATN2O00339 956 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 TERTO14746 1132 aaKnown RBP12.85□□□□□ -0.35
RNF4-215ENST00000511843 KATNA1O75449 491 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 SCRG1O75711 98 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 SLCO2B1O94956 709 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 CTSBP07858 339 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 MLNP12872 115 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 PKLRP30613 574 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 PTGIRP43119 386 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 RPS18P62269 152 aaKnown RBP12.85□□□□□ -0.35
RNF4-215ENST00000511843 PLOD1Q02809 727 aaPredicted RBP12.85□□□□□ -0.35
RNF4-215ENST00000511843 CDC20Q12834 499 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 MAP7Q14244 749 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 GRB7Q14451 532 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 DNAJC21Q5F1R6 531 aaKnown RBP12.85□□□□□ -0.35
RNF4-215ENST00000511843 NEPROQ6NW34 567 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 CNSTQ6PJW8 725 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 CDHR3Q6ZTQ4 885 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 OTOAQ7RTW8 1153 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 SDCCAG8Q86SQ7 713 aaPredicted RBP12.85□□□□□ -0.35
RNF4-215ENST00000511843 LRRC6Q86X45 466 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 CREG2Q8IUH2 290 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 CILP2Q8IUL8 1156 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 DENND6AQ8IWF6 608 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 LINC01555Q8NAE3 123 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 SLC38A9Q8NBW4 561 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 LSM14AQ8ND56 463 aaKnown RBP12.85□□□□□ -0.35
RNF4-215ENST00000511843 OR1L3Q8NH93 324 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 SIGLEC10Q96LC7 697 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 PANX3Q96QZ0 392 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 NAPGQ99747 312 aaPredicted RBP12.85□□□□□ -0.35
RNF4-215ENST00000511843 TRIM51Q9BSJ1 452 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 FAM60AQ9NP50 221 aa12.85□□□□□ -0.35
RNF4-215ENST00000511843 FBXO6Q9NRD1 293 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms