RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LY9Q9HBG7 655 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC38A7Q9NVC3 462 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 FBXO28Q9NVF7 368 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 GDAP2Q9NXN4 497 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 GAR1Q9NY12 217 aaKnown RBP4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 NCKIPSDQ9NZQ3 722 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 COPG2Q9UBF2 871 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 ASIC3Q9UHC3 531 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC7A8Q9UHI5 535 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 XPO7Q9UIA9 1087 aaKnown RBP4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 DAPK2Q9UIK4 370 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 ANAPC5Q9UJX4 755 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 VANGL2Q9ULK5 521 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 MAFFQ9ULX9 164 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 PCDHA12Q9UN75 941 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 PA2G4Q9UQ80 394 aaKnown RBP4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 NAALADL1Q9UQQ1 740 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 GDAQ9Y2T3 454 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 AP4B1Q9Y6B7 739 aa4.53□□□□□ -1.68
PDLIM5-211ENST00000508531 TJP1Q07157 1748 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 NFASCO94856 1347 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 TRIM49BA6NDI0 452 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 CAPN8A6NHC0 703 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 SAC3D1A6NKF1 404 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 YDJCA8MPS7 323 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 YKT6O15498 198 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 KLRC4O43908 158 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT1A9O60656 530 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 SERPINI2O75830 405 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 FAM155BO75949 473 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 CLPXO76031 633 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 MTA2O94776 668 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ACSL3O95573 720 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 BCL10O95999 233 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 CRYABP02511 175 aaKnown RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 RPS17P08708 135 aaKnown RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ATP6V1B1P15313 513 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT1A6P19224 532 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 CCNA2P20248 432 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 IMPDH1P20839 514 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 CD9P21926 228 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT1A1P22309 533 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT1A4P22310 534 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 TBXAS1P24557 533 aaPredicted RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 FOXN2P32314 431 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT1A3P35503 534 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT1A5P35504 534 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC16A2P36021 539 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 RXRGP48443 463 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 THBS3P49746 956 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 RGS7P49802 495 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 HTR6P50406 440 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 GATMP50440 423 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 AP3M2P53677 418 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 AP2S1P53680 142 aaPredicted RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 NANOS2P60321 138 aaKnown RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 EIF4A1P60842 406 aaKnown RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 B2MP61769 119 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 BTKQ06187 659 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 SCRN3Q0VDG4 424 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 TFCP2Q12800 502 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 COASYQ13057 564 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 IFIT5Q13325 482 aaKnown RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 PPIL2Q13356 520 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 TMED2Q15363 201 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 LRRC36Q1X8D7 754 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF750Q32MQ0 723 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ARHGEF16Q5VV41 709 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 PLEKHA7Q6IQ23 1121 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 KIF6Q6ZMV9 814 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 MFSD6Q6ZSS7 791 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 CYP4V2Q6ZWL3 525 aaPredicted RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 RAPH1Q70E73 1250 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 CHST3Q7LGC8 479 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 PIM3Q86V86 326 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 KBTBD6Q86V97 674 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 CRLF3Q8IUI8 442 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 METTL25Q8N6Q8 603 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ARFGAP1Q8N6T3 406 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 C12orf76Q8N812 135 aaPredicted RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 C11orf44Q8N8P7 122 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ASCC1Q8N9N2 400 aaKnown RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 IGFBPL1Q8WX77 278 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ATP2A3Q93084 1043 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 TRIM43Q96BQ3 446 aaPredicted RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 CCDC127Q96BQ5 260 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ISOC1Q96CN7 298 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 EDC3Q96F86 508 aaKnown RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF486Q96H40 463 aaPredicted RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ZFYVE19Q96K21 471 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 TWNKQ96RR1 684 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 THTPAQ9BU02 230 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 KIFC3Q9BVG8 833 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 FRMD8Q9BZ67 464 aaPredicted RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 TRIM15Q9C019 465 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 PSTPIP2Q9H939 334 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT1A7Q9HAW7 530 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT1A10Q9HAW8 530 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT1A8Q9HAW9 530 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms