RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 UBXN10Q96LJ8 280 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 FERD3LQ96RJ6 166 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 HGH1Q9BTY7 390 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 SLC12A9Q9BXP2 914 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 TRIM54Q9BYV2 358 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 TFB2MQ9H5Q4 396 aaKnown RBP9.98□□□□□ -0.81
HTT-204ENST00000508321 CAAP1Q9H8G2 361 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 CAB39LQ9H9S4 337 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 NMRAL1Q9HBL8 299 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 KCNK4Q9NYG8 393 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 DLL3Q9NYJ7 618 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 GALPQ9UBC7 116 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 APOBEC2Q9Y235 224 aaKnown RBP9.98□□□□□ -0.81
HTT-204ENST00000508321 CFAP20Q9Y6A4 193 aaKnown RBP9.98□□□□□ -0.81
HTT-204ENST00000508321 RNF215Q9Y6U7 377 aa9.98□□□□□ -0.81
HTT-204ENST00000508321 UQCRHLA0A096LP55 91 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 GOLGA6L10A6NI86 522 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 SYCE1LA8MT33 242 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 ARHGEF33A8MVX0 844 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 BTN3A1O00481 513 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 DKK1O94907 266 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 FKBP9O95302 570 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 C1orf105O95561 183 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 C2P06681 752 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 UQCRHP07919 91 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 HIST1H2AGP0C0S8 130 aaPredicted RBP9.97□□□□□ -0.81
HTT-204ENST00000508321 CCDC166P0CW27 439 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 ERGP11308 486 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 KRT15P19012 456 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 HIST1H2ADP20671 130 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 PKLRP30613 574 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 SLCO1A2P46721 670 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 NOVA1P51513 510 aaKnown RBP9.97□□□□□ -0.81
HTT-204ENST00000508321 CDKL1Q00532 357 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 ZNF844Q08AG5 666 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 SQSTM1Q13501 440 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 ZNF460Q14592 562 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 CASP8Q14790 479 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 RSPO4Q2I0M5 234 aaPredicted RBP9.97□□□□□ -0.81
HTT-204ENST00000508321 KRT71Q3SY84 523 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 CDKL4Q5MAI5 379 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 DUS1LQ6P1R4 473 aaKnown RBP9.97□□□□□ -0.81
HTT-204ENST00000508321 FBXO38Q6PIJ6 1188 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 FRA10AC1Q70Z53 315 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 UBE2R2Q712K3 238 aaPredicted RBP9.97□□□□□ -0.81
HTT-204ENST00000508321 OOSP2Q86WS3 158 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 IQCKQ8N0W5 287 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 CARFQ8N187 725 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 DEFB124Q8NES8 71 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 OR52E1Q8NGJ3 308 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 OR5AR1Q8NGP9 310 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 RHEBL1Q8TAI7 183 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 HMGCLL1Q8TB92 370 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 MCOLN3Q8TDD5 553 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 MZB1Q8WU39 189 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 ATL1Q8WXF7 558 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 HIST1H2AHQ96KK5 128 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 HIST1H2AJQ99878 128 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 CCDC3Q9BQI4 270 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 H2AFJQ9BTM1 129 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 RAB33BQ9H082 229 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 VIPAS39Q9H9C1 493 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 RDH14Q9HBH5 336 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 PARVBQ9HBI1 364 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 OR6C2Q9NZP2 312 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 CTNNAL1Q9UBT7 734 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 TMCO1Q9UM00 188 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 ENTPD2Q9Y5L3 495 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 NFS1Q9Y697 457 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 DMXL1Q9Y485 3027 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 ASXL3Q9C0F0 2248 aa9.97□□□□□ -0.81
HTT-204ENST00000508321 IGHV1OR21-1A0A087WYE8 117 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 CPED1A4D0V7 1026 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 SMIM23A6NLE4 172 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 PPM1DO15297 605 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 KERAO60938 352 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 UBXN7O94888 489 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 KLHL2O95198 593 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 MT-ND3P03897 115 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 GSTA1P08263 222 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 MYZAPP0CAP1 466 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 CD1DP15813 335 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 BDKRB1P46663 353 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 ID4P47928 161 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 ABRQ12979 859 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 PRKAA1Q13131 559 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 CSHL1Q14406 222 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 PUM1Q14671 1186 aaKnown RBP eCLIP9.96□□□□□ -0.82
HTT-204ENST00000508321 NAA25Q14CX7 972 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 ACAP2Q15057 778 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 PPP1R3AQ16821 1122 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.96□□□□□ -0.82
HTT-204ENST00000508321 ANKS6Q68DC2 871 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 WDR74Q6RFH5 385 aaPredicted RBP9.96□□□□□ -0.82
HTT-204ENST00000508321 SBSNQ6UWP8 590 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 TMEM207Q6UWW9 146 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 CYHR1Q6ZMK1 362 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 HDXQ7Z353 690 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 CLEC14AQ86T13 490 aa9.96□□□□□ -0.82
HTT-204ENST00000508321 AMIGO1Q86WK6 493 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms