RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FAM167BQ9BTA0 163 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 FAM117AQ9C073 453 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 CHRNA10Q9GZZ6 450 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 CCDC68Q9H2F9 335 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 SOHLH2Q9NX45 425 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 ICKQ9UPZ9 632 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 PCDHGA4Q9Y5G9 962 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 FAM169AQ9Y6X4 670 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 NBEAQ8NFP9 2946 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 IQCF5A8MTL0 148 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 BTN3A3O00478 584 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 PKMP14618 531 aaKnown RBP19.27■□□□□ 0.68
SFXN1-209ENST00000508290 CCNFP41002 786 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 KIR2DS3Q14952 304 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 TTLL9Q3SXZ7 439 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 IZUMO3Q5VZ72 239 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 C6orf15Q6UXA7 325 aaPredicted RBP19.27■□□□□ 0.68
SFXN1-209ENST00000508290 ADGRF3Q8IZF5 1079 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 TWSG1Q9GZX9 223 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 GPN2Q9H9Y4 310 aaPredicted RBP19.27■□□□□ 0.68
SFXN1-209ENST00000508290 ACTR10Q9NZ32 417 aa19.27■□□□□ 0.68
SFXN1-209ENST00000508290 TDRKHQ9Y2W6 561 aaKnown RBP19.27■□□□□ 0.68
SFXN1-209ENST00000508290 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.27■□□□□ 0.68
SFXN1-209ENST00000508290 EIF4E1BA6NMX2 242 aaKnown RBP19.26■□□□□ 0.67
SFXN1-209ENST00000508290 E5RI56 91 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 SPAG6O75602 509 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 FKBP9O95302 570 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 CCNYL3P0C7X3 344 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 FOLR1P15328 257 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 FMO4P31512 558 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 STAT5AP42229 794 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 MC1RQ01726 317 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 CRTC2Q53ET0 693 aaPredicted RBP19.26■□□□□ 0.67
SFXN1-209ENST00000508290 CTSL3PQ5NE16 218 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 SPESP1Q6UW49 350 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 UNC5AQ6ZN44 842 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 CENPUQ71F23 418 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 VASH2Q86V25 355 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 KLHL7Q8IXQ5 586 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 KRT222Q8N1A0 295 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 BBOF1Q8ND07 529 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 LKAAEAR1Q8TD35 194 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 KCNJ9Q92806 393 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 RAD51AP1Q96B01 352 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 SLC45A3Q96JT2 553 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 EBNA1BP2Q99848 306 aaKnown RBP19.26■□□□□ 0.67
SFXN1-209ENST00000508290 C20orf96Q9NUD7 363 aaPredicted RBP19.26■□□□□ 0.67
SFXN1-209ENST00000508290 IGSF10Q6WRI0 2623 aa19.26■□□□□ 0.67
SFXN1-209ENST00000508290 SLC9B1P1A6NJY1 282 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 ZNF891A8MT65 544 aaPredicted RBP19.25■□□□□ 0.67
SFXN1-209ENST00000508290 GOLGA8KD6RF30 607 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 GOLGA8TH3BQL2 631 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 CHRM5P08912 532 aaPredicted RBP19.25■□□□□ 0.67
SFXN1-209ENST00000508290 EBLN1P0CF75 366 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 CHRM3P20309 590 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 IVDP26440 423 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 CSE1LP55060 971 aaKnown RBP19.25■□□□□ 0.67
SFXN1-209ENST00000508290 ETF1P62495 437 aaKnown RBP19.25■□□□□ 0.67
SFXN1-209ENST00000508290 KYNUQ16719 465 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 SLC5A12Q1EHB4 618 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 SPANXN3Q5MJ09 141 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 NAPRTQ6XQN6 538 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 ZNF501Q96CX3 271 aaPredicted RBP19.25■□□□□ 0.67
SFXN1-209ENST00000508290 TCTN2Q96GX1 697 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 SNF8Q96H20 258 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 CATSPER2Q96P56 530 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 LNPEPQ9UIQ6 1025 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 CRYL1Q9Y2S2 319 aa19.25■□□□□ 0.67
SFXN1-209ENST00000508290 CPNE3O75131 537 aaKnown RBP19.24■□□□□ 0.67
SFXN1-209ENST00000508290 KIAA0754O94854 1291 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 S1PR4O95977 384 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 LIFP15018 202 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 PKLRP30613 574 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 CASQ1P31415 396 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 GBX1Q14549 363 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 CRYMQ14894 314 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 SOWAHCQ53LP3 525 aaPredicted RBP19.24■□□□□ 0.67
SFXN1-209ENST00000508290 TAF1BQ53T94 588 aaPredicted RBP19.24■□□□□ 0.67
SFXN1-209ENST00000508290 KIAA0408Q6ZU52 694 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 NEK10Q6ZWH5 1172 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 TIPARPQ7Z3E1 657 aaKnown RBP19.24■□□□□ 0.67
SFXN1-209ENST00000508290 MAATS1Q7Z4T9 603 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 VRK3Q8IV63 474 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 ZBTB2Q8N680 514 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 SKA2Q8WVK7 121 aaPredicted RBP19.24■□□□□ 0.67
SFXN1-209ENST00000508290 SEC14L1Q92503 715 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 LRFN5Q96NI6 719 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 TRAPPC9Q96Q05 1148 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 XKR8Q9H6D3 395 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 FAM114A2Q9NRY5 505 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 KCND3Q9UK17 655 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 PADI1Q9ULC6 663 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 SLC39A10Q9ULF5 831 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 PCDHB3Q9Y5E6 796 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 PIKFYVEQ9Y2I7 2098 aa19.24■□□□□ 0.67
SFXN1-209ENST00000508290 SDK2Q58EX2 2172 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 A0A0J9YY10 115 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 C21orf140B9A014 251 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 EIF3FO00303 357 aaPredicted RBP19.23■□□□□ 0.67
SFXN1-209ENST00000508290 RASGRF2O14827 1237 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms