RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 CASRP41180 1078 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 GABRA4P48169 554 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 PMS2P54278 862 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 GSDMDP57764 484 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 SESN2P58004 480 aaPredicted RBP13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 CRADDP78560 199 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 LACTB2Q53H82 288 aaPredicted RBP13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 PCID2Q5JVF3 399 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 TCTN3Q6NUS6 607 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 DRICH1Q6PGQ1 229 aaPredicted RBP13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 AFTPHQ6ULP2 937 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 SPESP1Q6UW49 350 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 ZNF662Q6ZS27 426 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 APLFQ8IW19 511 aaPredicted RBP13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 FAM20CQ8IXL6 584 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 OR5K2Q8NHB8 316 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 AP1M1Q9BXS5 423 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 SYTL2Q9HCH5 934 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 SERTAD3Q9UJW9 196 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 ANAPC2Q9UJX6 822 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 MAN2B2Q9Y2E5 1009 aa13.92□□□□□ -0.18
CDC42SE2-209ENST00000506419 SEC16AO15027 2179 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 TCRBV7S3A2A0A539 114 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 QSOX1O00391 747 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 ZNF749O43361 778 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 GAS8O95995 478 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 KLK3P07288 261 aaPredicted RBP13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 RAB40ALP0C0E4 278 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 GRB7Q14451 532 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 PTCHD3Q3KNS1 767 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 FASTKD1Q53R41 847 aaKnown RBP13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 ZNF385CQ66K41 422 aaPredicted RBP13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 CPZQ66K79 652 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 NLRP9Q7RTR0 991 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 SYVN1Q86TM6 617 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 KRT222Q8N1A0 295 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 ENDOVQ8N8Q3 282 aaKnown RBP13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 CCDC89Q8N998 374 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 ADAMTS17Q8TE56 1095 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 CPT1BQ92523 772 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 MENTQ9BUN1 341 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 CARD6Q9BX69 1037 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 ACTR5Q9H9F9 607 aaPredicted RBP13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 TREX1Q9NSU2 369 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 POLG2Q9UHN1 485 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 NBASA2RRP1 2371 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 HECTD1Q9ULT8 2610 aa13.91□□□□□ -0.18
CDC42SE2-209ENST00000506419 CYSRT1A8MQ03 144 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 MKRN2OSH3BPM6 223 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 CD3EAPO15446 510 aaKnown RBP13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 RFPL1O75677 317 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 FGGP02679 453 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 CBSLP0DN79 551 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 CYP2A7P20853 494 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 AOAHP28039 575 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 NMBRP28336 390 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 SHMT2P34897 504 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 CBSP35520 551 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 ITGA1P56199 1179 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 FOXK1P85037 733 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 PLOD1Q02809 727 aaPredicted RBP13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 HSPA14Q0VDF9 509 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 CHAF1BQ13112 559 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 CES3Q6UWW8 571 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 ASB18Q6ZVZ8 466 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 LRRC8AQ8IWT6 810 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 SYTL1Q8IYJ3 562 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 SLC22A15Q8IZD6 547 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 DNAJC22Q8N4W6 341 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 C2orf73Q8N5S3 287 aaPredicted RBP13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 LINC01555Q8NAE3 123 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 THAP4Q8WY91 577 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 PEX13Q92968 403 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■■■■■ 41.8
CDC42SE2-209ENST00000506419 TCTN2Q96GX1 697 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 TTC1Q99614 292 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 NLNQ9BYT8 704 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 P2RY12Q9H244 342 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 FANCEQ9HB96 536 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 OR6C2Q9NZP2 312 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 CIDEBQ9UHD4 219 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 TCFL5Q9UL49 500 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 KLHL20Q9Y2M5 609 aa13.9□□□□□ -0.18
CDC42SE2-209ENST00000506419 ARGFXA6NJG6 315 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 E7EQ34 232 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 CEP104O60308 925 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 SLCO2B1O94956 709 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 CXCR5P32302 372 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 NPY2RP49146 381 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 CCL11P51671 97 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 PRAMEP78395 509 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 CCZ1BP86790 482 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 CCZ1P86791 482 aaPredicted RBP13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 KLRB1Q12918 225 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 KYNUQ16719 465 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 DEFB110Q30KQ9 67 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 SYTL3Q4VX76 610 aa13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 DNAJC21Q5F1R6 531 aaKnown RBP13.89□□□□□ -0.19
CDC42SE2-209ENST00000506419 FAM198BQ6UWH4 519 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms