RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CCNA2P20248 432 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 TM4SF4P48230 202 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 ZXDBP98169 803 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 VAC14Q08AM6 782 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 NFATC3Q12968 1075 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 TTC23Q5W5X9 447 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 XAF1Q6GPH4 301 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 ANKRD26P1Q6NSI1 321 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 TSPAN33Q86UF1 283 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 C10orf111Q8N326 155 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 TERB1Q8NA31 727 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 ZNF461Q8TAF7 563 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 TBC1D15Q8TC07 691 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 OVCA2Q8WZ82 227 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 SNX19Q92543 992 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 NRBF2Q96F24 287 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 CCDC115Q96NT0 180 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 MBOAT4Q96T53 435 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 TUBA1CQ9BQE3 449 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 CLSTN3Q9BQT9 956 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 OSBPL10Q9BXB5 764 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 DGCR6LQ9BY27 220 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 CLMPQ9H6B4 373 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 PARVBQ9HBI1 364 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 ARL15Q9NXU5 204 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 LMCD1Q9NZU5 365 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 WARS2Q9UGM6 360 aaKnown RBP7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 GMEB1Q9Y692 573 aa7.46□□□□□ -1.22
PPARGC1A-204ENST00000506055 AREL1O15033 823 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 CREG1O75629 220 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 CLDN9O95484 217 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 CPNE6O95741 557 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 PDYNP01213 254 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 TRBC1P01850 177 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 AGXTP21549 392 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 RPS3P23396 243 aaKnown RBP eCLIP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 RPIAP49247 311 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 PHC1P78364 1004 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 KCNAB2Q13303 367 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 BFSP2Q13515 415 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 SPIDRQ14159 915 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 PON2Q15165 354 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 RUNDC3AQ59EK9 446 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 TXNDC8Q6A555 127 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 C16orf87Q6PH81 154 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 TRIM46Q7Z4K8 759 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 TMEM179BQ7Z7N9 219 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 SPARTQ8N0X7 666 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 ARL14EPQ8N8R7 260 aaPredicted RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 GLB1L3Q8NCI6 653 aaPredicted RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 GIPC3Q8TF64 312 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 LZICQ8WZA0 190 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 ACDQ96AP0 544 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 PYCR2Q96C36 320 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 ITCHQ96J02 903 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 CCDC138Q96M89 665 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 TSSK3Q96PN8 268 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 SH3GL1Q99961 368 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 CCDC90BQ9GZT6 254 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 KAT8Q9H7Z6 458 aaKnown RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 DNAAF2Q9NVR5 837 aaKnown RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 C1orf109Q9NX04 203 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 MTRRQ9UBK8 725 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 DLGAP4Q9Y2H0 992 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 OR51B4Q9Y5P0 310 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 LOC100130705A0A1B0GUX0 176 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 KRT87PA6NCN2 255 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 PRRG1O14668 218 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 ABCB7O75027 752 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 SEC14L2O76054 403 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 EBLN1P0CF75 366 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 PLA2G16P53816 162 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 TMBIM6P55061 237 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 C21orf59P57076 290 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 AP1S1P61966 158 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 IL1RL1Q01638 556 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 LAPTM4AQ15012 233 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 CTU2Q2VPK5 515 aaKnown RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 USP39Q53GS9 565 aaKnown RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 RBM48Q5RL73 367 aaKnown RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 C6orf141Q5SZD1 244 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 RETSATQ6NUM9 610 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 ZNF783Q6ZMS7 281 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 TPGS1Q6ZTW0 290 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 DNAJB7Q7Z6W7 309 aaPredicted RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 GALNT5Q7Z7M9 940 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 RBM23Q86U06 439 aaKnown RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 ADHFE1Q8IWW8 467 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 MICU2Q8IYU8 434 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 HJURPQ8NCD3 748 aaPredicted RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 GPR26Q8NDV2 337 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 TANKQ92844 425 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 FAM120BQ96EK7 910 aaKnown RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 SCLYQ96I15 445 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 RBM4BQ9BQ04 359 aaKnown RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 INPP5KQ9BT40 448 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 NTMT1Q9BV86 223 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 RBM4Q9BWF3 364 aaKnown RBP7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 VN1R3Q9BXE9 311 aa7.45□□□□□ -1.22
PPARGC1A-204ENST00000506055 MRPL9Q9BYD2 267 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms