RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 DET1Q7L5Y6 550 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 SPRED2Q7Z698 418 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 PTRH1Q86Y79 214 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 SNX31Q8N9S9 440 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 TERB1Q8NA31 727 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 POP5Q969H6 163 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 TMEM245Q9H330 911 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 ARMC1Q9NVT9 282 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 NME4O00746 187 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 AREL1O15033 823 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 IL6P05231 212 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 UQCRBP14927 111 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 TCN1P20061 433 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 VARSP26640 1264 aaKnown RBP16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 PEX2P28328 305 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 TMEM184AQ6ZMB5 413 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 HID1Q8IV36 788 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 C1orf50Q9BV19 199 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 MCOLN1Q9GZU1 580 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 EBF3Q9H4W6 596 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 ZFP14Q9HCL3 533 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 PIKFYVEQ9Y2I7 2098 aa16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 KIF26AQ9ULI4 1882 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 MUC22E2RYF6 1773 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC11-204ENST00000505676 SLC5A10A0PJK1 596 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 PRRT4C9JH25 899 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 ANKRD28O15084 1053 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 SLC2A4P14672 509 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 GDF5P43026 501 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 PNLIPRP1P54315 467 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 FCHO2Q0JRZ9 810 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 TMEM115Q12893 351 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 GRAMD1BQ3KR37 738 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 C10orf62Q5T681 223 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 FAM46CQ5VWP2 391 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 TMEM125Q96AQ2 219 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 NUS1Q96E22 293 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 HDAC8Q9BY41 377 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 ELOVL6Q9H5J4 265 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 C8orf4Q9NR00 106 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 RNF11Q9Y3C5 154 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 NPC1O15118 1278 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 GPIP06744 558 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 UMPSP11172 480 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 G6PDP11413 515 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 GTF2H3Q13889 308 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 PROSER1Q86XN7 944 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 SLC22A15Q8IZD6 547 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 C12orf76Q8N812 135 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 DCBLD1Q8N8Z6 715 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 OR8J3Q8NGG0 315 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 NXPE3Q969Y0 559 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 LINC00615Q96LM1 132 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 SH3GL1Q99961 368 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 SCOCQ9UIL1 159 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 CDH7Q9ULB5 785 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 RAB26Q9ULW5 256 aa16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 POLR3HQ9Y535 204 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-204ENST00000505676 KCNE1BA0A087WTH5 132 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 C17orf113A0A1B0GUU1 675 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 FCGR1AP12314 374 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 ADRB3P13945 408 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 HSD3B1P14060 373 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 HSD3B2P26439 372 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 HTR1EP28566 365 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 HNRNPFP52597 415 aaKnown RBP16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 RPL38P63173 70 aaKnown RBP16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 MED21Q13503 144 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 ZNF234Q14588 700 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 FXNQ16595 210 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 PTCHD3Q3KNS1 767 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 SERPINA13PQ6UXR4 307 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 TICAM1Q8IUC6 712 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 RASGEF1AQ8N9B8 481 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 TNIP2Q8NFZ5 429 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 MYLIPQ8WY64 445 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 SUSD6Q92537 303 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 CMTM7Q96FZ5 175 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 ALG2Q9H553 416 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 CMTM6Q9NX76 183 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 GPRC5BQ9NZH0 403 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 SNX13Q9Y5W8 968 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 VEGFDO43915 354 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 JUPP14923 745 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 CSTF3Q12996 717 aaKnown RBP16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 PWP1Q13610 501 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 TIGD2Q4W5G0 525 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 RFTN2Q52LD8 501 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 LPCAT4Q643R3 524 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 MSANTD1Q6ZTZ1 278 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 ERN2Q76MJ5 926 aaKnown RBP16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 VRK3Q8IV63 474 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 RGL4Q8IZJ4 473 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 NAT14Q8WUY8 206 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 SELENOMQ8WWX9 145 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 TEX37Q96LM6 180 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 DPY30Q9C005 99 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 PCDHAC1Q9H158 963 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 MAPRE3Q9UPY8 281 aa16.85■□□□□ 0.29
TRAPPC11-204ENST00000505676 ASPDHA6ND91 283 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms