RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PIGWQ7Z7B1 504 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 CNGA4Q8IV77 575 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 SMPDL3BQ92485 455 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 RND1Q92730 232 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 TSGA13Q96PP4 275 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 MTERF1Q99551 399 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 CMKLR1Q99788 373 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 BTBD10Q9BSF8 475 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 OSBPL8Q9BZF1 889 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 SEMA6AQ9H2E6 1030 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 HSD3B7Q9H2F3 369 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 PCDH9Q9HC56 1237 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 ZBTB40Q9NUA8 1239 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 TAS2R3Q9NYW6 316 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 NINJ2Q9NZG7 142 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 NPAP1Q9NZP6 1156 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 TXNDC16Q9P2K2 825 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 GMEB2Q9UKD1 530 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 YIPF1Q9Y548 306 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 TRIM17Q9Y577 477 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 PRAG1Q86YV5 1406 aa3.73□□□□□ -1.81
TRAPPC13-208ENST00000505553 IGHV4-28A0A0C4DH34 117 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 TRBV2A0A0J9YWF9 115 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 ELOVL7A1L3X0 281 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 FAM90A10PA6NDY2 464 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 MANSC4A6NHS7 340 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 SOCS6O14544 535 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 OR10H2O60403 315 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 NOL3O60936 208 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 GAGE7O76087 117 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 DDNO94850 711 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 CH25HO95992 272 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 ALPPP05187 535 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 FGF2P09038 288 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 GAGE12FP0CL80 117 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 GAGE12GP0CL81 117 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 GAGE12IP0CL82 117 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 CCDC192P0DO97 292 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 ALPPL2P10696 532 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 EPCAMP16422 314 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 ARF4P18085 180 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 MPZP25189 248 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 TKTP29401 623 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 IER3P46695 156 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 ATXN3P54252 364 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 ADARP55265 1226 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 PDE1BQ01064 536 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 GFPT1Q06210 699 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 TROAPQ12815 778 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 GAGE1Q13065 139 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 GAGE4Q13068 117 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 SLC39A14Q15043 492 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 HSP90AA5PQ58FG0 334 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 FSCBQ5H9T9 825 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 LRRC38Q5VT99 294 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 Q6ZSV7 163 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 ATG9AQ7Z3C6 839 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 MAP7D3Q8IWC1 876 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 CHERPQ8IWX8 916 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 SRRM1Q8IYB3 904 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 CNNM3Q8NE01 707 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 NEK11Q8NG66 645 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 OR2AK2Q8NG84 335 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 HMGCLL1Q8TB92 370 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 SSMEM1Q8WWF3 244 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 WASF1Q92558 559 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 PRCCQ92733 491 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 SLC25A28Q96A46 364 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 SGF29Q96ES7 293 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 CFAP36Q96G28 342 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 FAM111AQ96PZ2 611 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 MYCBPQ99417 103 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 NAP1L3Q99457 506 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 SNX25Q9H3E2 840 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 DNAJC11Q9NVH1 559 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 MAD2L2Q9UI95 211 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 PADI3Q9ULW8 664 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 PTPRCP08575 1304 aa3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 ARHGEF17Q96PE2 2063 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-208ENST00000505553 A0A1W2PP11 408 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 MED19A0JLT2 244 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 FAM149AA5PLN7 773 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 DNAJC9-AS1A6NH13 148 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 ANKRD66B4E2M5 251 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 I6L893 689 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 PLOD2O00469 737 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 CTDSPLO15194 276 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 FLRT2O43155 660 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 GPR137BO60478 399 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 RBMXL2O75526 392 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRDM1O75626 825 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 GLCEO94923 617 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 NDUFB8O95169 186 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 LETM1O95202 739 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 PLGP00747 810 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 LBPP18428 481 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 CCNA2P20248 432 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 PSMB4P28070 264 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 MPGP29372 298 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms