RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PLOD1Q02809 727 aaPredicted RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 ASPHQ12797 758 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 LCP2Q13094 533 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 PRKAA1Q13131 559 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 CLCA4Q14CN2 919 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 KANK2Q63ZY3 851 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 ANKS6Q68DC2 871 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 ENPP7Q6UWV6 458 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 FRA10AC1Q70Z53 315 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 CHST15Q7LFX5 561 aaPredicted RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 CPLX4Q7Z7G2 160 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 SYVN1Q86TM6 617 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 WDR5BQ86VZ2 330 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 SPATS2Q86XZ4 545 aaKnown RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 GALNT13Q8IUC8 556 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 CRLF3Q8IUI8 442 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 WDR75Q8IWA0 830 aaKnown RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 ANKS4BQ8N8V4 417 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 LMNTD1Q8N9Z9 388 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 OR52B6Q8NGF0 335 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 OR5AR1Q8NGP9 310 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 OR56A3Q8NH54 315 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 PPP1R14CQ8TAE6 165 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 STON2Q8WXE9 905 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 DNASE2BQ8WZ79 361 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 TSACCQ96A04 125 aaPredicted RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 SKA1Q96BD8 255 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 PRR11Q96HE9 360 aaPredicted RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 MAELQ96JY0 434 aaKnown RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 ZNF382Q96SR6 550 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 INSM2Q96T92 566 aaPredicted RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 TMEM120AQ9BXJ8 343 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 CD244Q9BZW8 370 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 CARS2Q9HA77 564 aaKnown RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 STOX2Q9P2F5 926 aaPredicted RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 CIDEBQ9UHD4 219 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 ZNHIT2Q9UHR6 403 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 DNAH14Q0VDD8 3507 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 PRAMEF33A0A0G2JMD5 474 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 KLHL33A6NCF5 533 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 SDHDO14521 159 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 KCNJ13O60928 360 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 FGF4P08620 206 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 ANXA5P08758 320 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 THEGLP0DJG4 465 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 KITP10721 976 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 CYP2A7P20853 494 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 AK4P27144 223 aaPredicted RBP10.11□□□□□ -0.79
TPM3-217ENST00000504663 MAOBP27338 520 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 INHBCP55103 352 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 ERVPABLB-1P60509 514 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 SRP54P61011 504 aaKnown RBP10.11□□□□□ -0.79
TPM3-217ENST00000504663 CTBSQ01459 385 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 RPL6Q02878 288 aaKnown RBP10.11□□□□□ -0.79
TPM3-217ENST00000504663 VAC14Q08AM6 782 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 E2F2Q14209 437 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 SPRED3Q2MJR0 410 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 SLC9B1Q4ZJI4 515 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 VWA5B1Q5TIE3 1220 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 GKAP1Q5VSY0 366 aaPredicted RBP10.11□□□□□ -0.79
TPM3-217ENST00000504663 LETMD1Q6P1Q0 360 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 METTL2BQ6P1Q9 378 aaKnown RBP10.11□□□□□ -0.79
TPM3-217ENST00000504663 EPGNQ6UW88 154 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 LRRC70Q7Z2Q7 622 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.11□□□□□ -0.79
TPM3-217ENST00000504663 GPBAR1Q8TDU6 330 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 TRPC4APQ8TEL6 797 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 ZNF480Q8WV37 535 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 HSPA12BQ96MM6 686 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 OR4K3Q96R72 315 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 KCNA7Q96RP8 456 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 TRIM55Q9BYV6 548 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 TMEM168Q9H0V1 697 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 DUSP15Q9H1R2 295 aaPredicted RBP10.11□□□□□ -0.79
TPM3-217ENST00000504663 MYLK2Q9H1R3 596 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 TUBB1Q9H4B7 451 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 TM9SF3Q9HD45 589 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 SEMA4BQ9NPR2 832 aaPredicted RBP10.11□□□□□ -0.79
TPM3-217ENST00000504663 PRDM8Q9NQV8 689 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 SPATA6Q9NWH7 488 aaPredicted RBP10.11□□□□□ -0.79
TPM3-217ENST00000504663 DNAJC28Q9NX36 388 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 ARL15Q9NXU5 204 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 KCNK4Q9NYG8 393 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 KLQ9UEF7 1012 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 TBC1D29Q9UFV1 150 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 DCTN4Q9UJW0 460 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 PCOLCE2Q9UKZ9 415 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 PSMD13Q9UNM6 376 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 SH2B3Q9UQQ2 575 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 PCDH15Q96QU1 1955 aa10.11□□□□□ -0.79
TPM3-217ENST00000504663 ARHGEF17Q96PE2 2063 aaPredicted RBP10.11□□□□□ -0.79
TPM3-217ENST00000504663 A0A1W2PPV9 198 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 K7EPI3 171 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 SNX2O60749 519 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 SNUPNO95149 360 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 ESRRBO95718 433 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 SLC16A8O95907 504 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 CATP04040 527 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 TROVE2P10155 538 aaKnown RBP eCLIP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms