RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 LCN10Q6JVE6 187 aa18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 CDHR3Q6ZTQ4 885 aa18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 LDB1Q86U70 411 aaPredicted RBP18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 C19orf47Q8N9M1 422 aaKnown RBP18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 MAIP1Q8WWC4 291 aa18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 LRFN5Q96NI6 719 aa18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 TSSK1BQ9BXA7 367 aa18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 EIF2B3Q9NR50 452 aaKnown RBP18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 CHRAC1Q9NRG0 131 aa18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 SPHK1Q9NYA1 384 aa18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 MYO18BQ8IUG5 2567 aa18.81■□□□□ 0.6
UBE2D3-215ENST00000503418 SNRNP200O75643 2136 aaKnown RBP18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 IQCF5A8MTL0 148 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 E7EQ34 232 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 KDM1AO60341 852 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 DNAJB5O75953 348 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 CHRM5P08912 532 aaPredicted RBP18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 CCR7P32248 378 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 CASRP41180 1078 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 KCNJ1P48048 391 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 ITGA1P56199 1179 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 DEFB110Q30KQ9 67 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 ZNF789Q5FWF6 425 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 AARS2Q5JTZ9 985 aaKnown RBP18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 PCID2Q5JVF3 399 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 DRICH1Q6PGQ1 229 aaPredicted RBP18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 ZNF517Q6ZMY9 492 aaPredicted RBP18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 SYTL1Q8IYJ3 562 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 ENDOVQ8N8Q3 282 aaKnown RBP18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 LKAAEAR1Q8TD35 194 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 THAP4Q8WY91 577 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 PEX13Q92968 403 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 OR2A14Q96R47 310 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 PCMTD2Q9NV79 361 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 MARCH4Q9P2E8 410 aaPredicted RBP18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 TLK1Q9UKI8 766 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 SNX7Q9UNH6 387 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 DRG1Q9Y295 367 aaKnown RBP18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 ZKSCAN5Q9Y2L8 839 aa18.8■□□□□ 0.6
UBE2D3-215ENST00000503418 ISM1B1AKI9 464 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 K7EM74 188 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 CEP104O60308 925 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 TPBGLP0DKB5 382 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 CXCR5P32302 372 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 RORAP35398 523 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 CHAF1BQ13112 559 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 KCTD19Q17RG1 926 aaPredicted RBP18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 PTCHD3Q3KNS1 767 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 CPZQ66K79 652 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 TCTN3Q6NUS6 607 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 C4orf22Q6V702 233 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 ZNF662Q6ZS27 426 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 VRK3Q8IV63 474 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 GPR135Q8IZ08 494 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 SLC22A15Q8IZD6 547 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 KRT222Q8N1A0 295 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 TRIM58Q8NG06 486 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 CFAP61Q8NHU2 1237 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 SGSM3Q96HU1 749 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 TRIM55Q9BYV6 548 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 FAM60AQ9NP50 221 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 OR6C2Q9NZP2 312 aa18.79■□□□□ 0.6
UBE2D3-215ENST00000503418 A0A0J9YY10 115 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 ARGFXA6NJG6 315 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 PRMT5O14744 637 aaPredicted RBP18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 CD3EAPO15446 510 aaKnown RBP18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 ZNF749O43361 778 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 APOA4P06727 396 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 RAB40ALP0C0E4 278 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 ATXN8OSP0DMR3 200 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 TTPAP49638 278 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 TERF1P54274 439 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 KLRB1Q12918 225 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 DNAJC21Q5F1R6 531 aaKnown RBP18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 FAM69BQ5VUD6 431 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 PTRHD1Q6GMV3 140 aaKnown RBP18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 ASB18Q6ZVZ8 466 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 APLFQ8IW19 511 aaPredicted RBP18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 LRRC8AQ8IWT6 810 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 OTUD6BQ8N6M0 293 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 ASZ1Q8WWH4 475 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 TCTN2Q96GX1 697 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 CARD6Q9BX69 1037 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 AP1M1Q9BXS5 423 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 NLNQ9BYT8 704 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 IL22Q9GZX6 179 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 BFARQ9NZS9 450 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 CIDEBQ9UHD4 219 aa18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 TNRC6AQ8NDV7 1962 aaKnown RBP18.78■□□□□ 0.6
UBE2D3-215ENST00000503418 ASH1LQ9NR48 2969 aaKnown RBP18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 SEC16AO15027 2179 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 OR2B3O76000 313 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 NMBRP28336 390 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 TMED2Q15363 201 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 ZIC1Q15915 447 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 FAM198BQ6UWH4 519 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 TEX19Q8NA77 164 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 ACSS2Q9NR19 701 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 IRAK4Q9NWZ3 460 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 TCFL5Q9UL49 500 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms