RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CDYLQ9Y232 598 aa15.73■□□□□ 0.11
SCLT1-204ENST00000503215 MAN2B2Q9Y2E5 1009 aa15.73■□□□□ 0.11
SCLT1-204ENST00000503215 CYSRT1A8MQ03 144 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 ARHGAP6O43182 974 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 RECKO95980 971 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 GAS8O95995 478 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 CHRM5P08912 532 aaPredicted RBP15.72■□□□□ 0.11
SCLT1-204ENST00000503215 OR56A5P0C7T3 313 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 PEBP1P30086 187 aaKnown RBP15.72■□□□□ 0.11
SCLT1-204ENST00000503215 CASRP41180 1078 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 RPS15P62841 145 aaKnown RBP15.72■□□□□ 0.11
SCLT1-204ENST00000503215 CCNG2Q16589 344 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 UGT8Q16880 541 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 DEFB110Q30KQ9 67 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 C2orf73Q8N5S3 287 aaPredicted RBP15.72■□□□□ 0.11
SCLT1-204ENST00000503215 ENDOVQ8N8Q3 282 aaKnown RBP15.72■□□□□ 0.11
SCLT1-204ENST00000503215 CPT1BQ92523 772 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 CLIP3Q96DZ5 547 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 LRFN5Q96NI6 719 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 SPRTNQ9H040 489 aaPredicted RBP15.72■□□□□ 0.11
SCLT1-204ENST00000503215 ACTR5Q9H9F9 607 aaPredicted RBP15.72■□□□□ 0.11
SCLT1-204ENST00000503215 KLHL20Q9Y2M5 609 aa15.72■□□□□ 0.11
SCLT1-204ENST00000503215 HECTD1Q9ULT8 2610 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 UBR5O95071 2799 aaPredicted RBP15.71■□□□□ 0.11
SCLT1-204ENST00000503215 TCRBV7S3A2A0A539 114 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 ESPNB1AK53 854 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 ZNF749O43361 778 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 RFPL1O75677 317 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 KLK3P07288 261 aaPredicted RBP15.71■□□□□ 0.11
SCLT1-204ENST00000503215 CYP2A7P20853 494 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 NMBRP28336 390 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 CXCR5P32302 372 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 GABRA4P48169 554 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 GSDMDP57764 484 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 PRAMEP78395 509 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 HSPA14Q0VDF9 509 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 SYTL3Q4VX76 610 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 FASTKD1Q53R41 847 aaKnown RBP15.71■□□□□ 0.11
SCLT1-204ENST00000503215 IZUMO3Q5VZ72 239 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 FAM198BQ6UWH4 519 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 CES3Q6UWW8 571 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 SYVN1Q86TM6 617 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 TMEM151BQ8IW70 566 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 TBC1D21Q8IYX1 336 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 OR5K2Q8NHB8 316 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCLT1-204ENST00000503215 GRPEL1Q9HAV7 217 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 FANCEQ9HB96 536 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 ANAPC2Q9UJX6 822 aa15.71■□□□□ 0.11
SCLT1-204ENST00000503215 DRG1Q9Y295 367 aaKnown RBP15.71■□□□□ 0.11
SCLT1-204ENST00000503215 SNRNP200O75643 2136 aaKnown RBP15.7■□□□□ 0.1
SCLT1-204ENST00000503215 ARGFXA6NJG6 315 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 H3BMH7 237 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 MKRN2OSH3BPM6 223 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 QSOX1O00391 747 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 GPC4O75487 556 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 FGGP02679 453 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 MSL3P1P0C860 447 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 SHMT2P34897 504 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 LYPLAL1Q5VWZ2 237 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 ZNF385CQ66K41 422 aaPredicted RBP15.7■□□□□ 0.1
SCLT1-204ENST00000503215 TCTN3Q6NUS6 607 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 DRICH1Q6PGQ1 229 aaPredicted RBP15.7■□□□□ 0.1
SCLT1-204ENST00000503215 ASB18Q6ZVZ8 466 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 APLFQ8IW19 511 aaPredicted RBP15.7■□□□□ 0.1
SCLT1-204ENST00000503215 SYTL1Q8IYJ3 562 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 SLC22A15Q8IZD6 547 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 C19orf47Q8N9M1 422 aaKnown RBP15.7■□□□□ 0.1
SCLT1-204ENST00000503215 CFAP61Q8NHU2 1237 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 ADAMTS17Q8TE56 1095 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 SGSM3Q96HU1 749 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 IL17FQ96PD4 163 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 AP1M1Q9BXS5 423 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 TREX1Q9NSU2 369 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 SERTAD3Q9UJW9 196 aa15.7■□□□□ 0.1
SCLT1-204ENST00000503215 TNRC6AQ8NDV7 1962 aaKnown RBP15.7■□□□□ 0.1
SCLT1-204ENST00000503215 RELNP78509 3460 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 COL12A1Q99715 3063 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 KRT87PA6NCN2 255 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 GOLGA6L6A8MZA4 724 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 CEP104O60308 925 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 CBSLP0DN79 551 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 ARNTP27540 789 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 CBSP35520 551 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 PTGIRP43119 386 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 CCL11P51671 97 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 ITGA1P56199 1179 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 FOXL2P58012 376 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 BASP1P80723 227 aaKnown RBP15.69■□□□□ 0.1
SCLT1-204ENST00000503215 CCZ1BP86790 482 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 CCZ1P86791 482 aaPredicted RBP15.69■□□□□ 0.1
SCLT1-204ENST00000503215 GRB7Q14451 532 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 PCID2Q5JVF3 399 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 ZNF662Q6ZS27 426 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 NLRP9Q7RTR0 991 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 SPNS2Q8IVW8 549 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 LINC01555Q8NAE3 123 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 PPHLN1Q8NEY8 458 aaKnown RBP15.69■□□□□ 0.1
SCLT1-204ENST00000503215 MENTQ9BUN1 341 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 NLNQ9BYT8 704 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms