RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 TBC1D20Q96BZ9 403 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 ZNF419Q96HQ0 510 aaPredicted RBP3.87□□□□□ -1.79
CLTC-209ENST00000498711 MAP6Q96JE9 813 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 RIPOR3Q96MK2 946 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 RDH12Q96NR8 316 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 DACH2Q96NX9 599 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 PPP1R10Q96QC0 940 aaKnown RBP3.87□□□□□ -1.79
CLTC-209ENST00000498711 OLFM1Q99784 485 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 ADI1Q9BV57 179 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 EIF2AQ9BY44 585 aaKnown RBP3.87□□□□□ -1.79
CLTC-209ENST00000498711 TRIM15Q9C019 465 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 WDR12Q9GZL7 423 aaKnown RBP3.87□□□□□ -1.79
CLTC-209ENST00000498711 MFSD1Q9H3U5 465 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 POMKQ9H5K3 350 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 NOL11Q9H8H0 719 aaKnown RBP3.87□□□□□ -1.79
CLTC-209ENST00000498711 NANOGQ9H9S0 305 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 TXNRD2Q9NNW7 524 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 DMRT3Q9NQL9 472 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 PDGFCQ9NRA1 345 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 INIPQ9NRY2 104 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 INTS10Q9NVR2 710 aaKnown RBP3.87□□□□□ -1.79
CLTC-209ENST00000498711 PIH1D1Q9NWS0 290 aaKnown RBP3.87□□□□□ -1.79
CLTC-209ENST00000498711 USE1Q9NZ43 259 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 FBXO5Q9UKT4 447 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 Q9Y3F1 56 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 SH3BP1Q9Y3L3 701 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 PCDHGB1Q9Y5G3 927 aa3.87□□□□□ -1.79
CLTC-209ENST00000498711 TRIP11Q15643 1979 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 TYW5A2RUC4 315 aaKnown RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 ASPDHA6ND91 283 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 FADS2P1A8MWK0 482 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 TMEM233B4DJY2 109 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 KCNK1O00180 336 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 TNPO2O14787 897 aaKnown RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 CFLARO15519 480 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 EEDO75530 441 aaKnown RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 APOL3O95236 402 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 AGR2O95994 175 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 ESR1P03372 595 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 DARSP14868 501 aaKnown RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 ADORA2BP29275 332 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 MSX2P35548 267 aaPredicted RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 SLC1A2P43004 574 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 SLC6A11P48066 632 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 KCNC1P48547 511 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 PRIM2P49643 509 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 LILRA4P59901 499 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 TPI1P60174 286 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 GABARAPL2P60520 117 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 EMX2Q04743 252 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 ADIGQ0VDE8 80 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 TUSC3Q13454 348 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 POLD3Q15054 466 aaPredicted RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 PPP1R3AQ16821 1122 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 AGKQ53H12 422 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 DCAF6Q58WW2 860 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 XKR7Q5GH72 579 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 RBM48Q5RL73 367 aaKnown RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 CCNYL2Q5T2Q4 361 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 AGAP9Q5VTM2 703 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 XAF1Q6GPH4 301 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 NANOGP8Q6NSW7 305 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 NIPAL1Q6NVV3 410 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 ZNF773Q6PK81 442 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 RTN4RL1Q86UN2 441 aaPredicted RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 DENND6AQ8IWF6 608 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 TBC1D21Q8IYX1 336 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 SHISA5Q8N114 240 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 CHCHD4Q8N4Q1 142 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 FAM110BQ8TC76 370 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 CALML6Q8TD86 181 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 ASB15Q8WXK1 588 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 NDRG1Q92597 394 aaKnown RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 TSPAN17Q96FV3 270 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 VMP1Q96GC9 406 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 ELMO2Q96JJ3 720 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 C3orf30Q96M34 536 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 TSNARE1Q96NA8 513 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 JMJD8Q96S16 334 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 NEURL2Q9BR09 285 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 COLEC11Q9BWP8 271 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 TRIM54Q9BYV2 358 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.86□□□□□ -1.79
CLTC-209ENST00000498711 UPF3AQ9H1J1 476 aaKnown RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 TFB2MQ9H5Q4 396 aaKnown RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 CXorf21Q9HAI6 301 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 NTN4Q9HB63 628 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 TBC1D13Q9NVG8 400 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 MYOTQ9UBF9 498 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 FBLN5Q9UBX5 448 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 ITGB1BP2Q9UKP3 347 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 NEUROG3Q9Y4Z2 214 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 OAS3Q9Y6K5 1087 aaKnown RBP3.86□□□□□ -1.79
CLTC-209ENST00000498711 MCM3APO60318 1980 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 LOC285095A0A1B0GVY8 99 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 UBXN8O00124 270 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 HAS3O00219 553 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 USP12O75317 370 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 VTNP04004 478 aa3.86□□□□□ -1.79
CLTC-209ENST00000498711 MMP2P08253 660 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms