RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 INTS1Q8N201 2190 aaKnown RBP11.22□□□□□ -0.61
ATG3-209ENST00000496423 SIRT6Q8N6T7 355 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 C19orf47Q8N9M1 422 aaKnown RBP11.22□□□□□ -0.61
ATG3-209ENST00000496423 WFDC11Q8NEX6 87 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 CCM2Q9BSQ5 444 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 SNRNP25Q9BV90 132 aaKnown RBP11.22□□□□□ -0.61
ATG3-209ENST00000496423 STK33Q9BYT3 514 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 CHRNA10Q9GZZ6 450 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 KLHL25Q9H0H3 589 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 CLEC4MQ9H2X3 399 aaPredicted RBP11.22□□□□□ -0.61
ATG3-209ENST00000496423 CLSTN2Q9H4D0 955 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 DEF6Q9H4E7 631 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 SOX17Q9H6I2 414 aaPredicted RBP11.22□□□□□ -0.61
ATG3-209ENST00000496423 NEUROD4Q9HD90 331 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.22□□□□□ -0.61
ATG3-209ENST00000496423 CWC15Q9P013 229 aaKnown RBP11.22□□□□□ -0.61
ATG3-209ENST00000496423 IL17CQ9P0M4 197 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 PCSK1NQ9UHG2 260 aa11.22□□□□□ -0.61
ATG3-209ENST00000496423 A0A1B0GX78 115 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 NKX2-6A6NCS4 301 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 NPIPA5E9PKD4 350 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 RAF1P04049 648 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 PBLDP30039 288 aaPredicted RBP11.21□□□□□ -0.61
ATG3-209ENST00000496423 RPL7AP62424 266 aaKnown RBP11.21□□□□□ -0.61
ATG3-209ENST00000496423 DSC2Q02487 901 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 OCA2Q04671 838 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 PTP4A2Q12974 167 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 OLIG2Q13516 323 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 DPYSQ14117 519 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 KEAP1Q14145 624 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 ATG9BQ674R7 924 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 TXNRD3NBQ6F5E7 133 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 ALG1LQ6GMV1 187 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 CCDC70Q6NSX1 233 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 HIBCHQ6NVY1 386 aaPredicted RBP11.21□□□□□ -0.61
ATG3-209ENST00000496423 CNSTQ6PJW8 725 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 SARM1Q6SZW1 724 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 TMC3Q7Z5M5 1100 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 PHF13Q86YI8 300 aaPredicted RBP11.21□□□□□ -0.61
ATG3-209ENST00000496423 SIMC1Q8NDZ2 872 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 RND1Q92730 232 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 FERD3LQ96RJ6 166 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 SECISBP2Q96T21 854 aaKnown RBP11.21□□□□□ -0.61
ATG3-209ENST00000496423 SPSB2Q99619 263 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 CRB3Q9BUF7 120 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 LIME1Q9H400 295 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 MAGEE1Q9HCI5 957 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 ZNF358Q9NW07 568 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 MAN1B1Q9UKM7 699 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 MKL2Q9ULH7 1088 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 NPIPA1Q9UND3 350 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 PLCL2Q9UPR0 1127 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 ATP6V1DQ9Y5K8 247 aa11.21□□□□□ -0.61
ATG3-209ENST00000496423 NBEAL1Q6ZS30 2694 aa11.21□□□□□ -0.62
ATG3-209ENST00000496423 MGAT4DA6NG13 374 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 USP27XA6NNY8 438 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 BTN3A1O00481 513 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 ARHGEF9O43307 516 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 TOXO94900 526 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 ONECUT2O95948 504 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 PVRP15151 417 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 PSMA2P25787 234 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 EEF1DP29692 281 aaKnown RBP11.2□□□□□ -0.62
ATG3-209ENST00000496423 PEX19P40855 299 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 PMP22Q01453 160 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 FMO1Q01740 532 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 LONRF2Q1L5Z9 754 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 DEFB110Q30KQ9 67 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 KLHDC7AQ5VTJ3 777 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 YOD1Q5VVQ6 348 aaPredicted RBP11.2□□□□□ -0.62
ATG3-209ENST00000496423 SHEQ5VZ18 495 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 ZDHHC20Q5W0Z9 365 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 ZNF449Q6P9G9 518 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 SPESP1Q6UW49 350 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 C3P1Q6ZMU1 363 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 FAM83HQ6ZRV2 1179 aaPredicted RBP11.2□□□□□ -0.62
ATG3-209ENST00000496423 SHISA6Q6ZSJ9 500 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 AMIGO1Q86WK6 493 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 FAM20CQ8IXL6 584 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 FMR1NBQ8N0W7 255 aaPredicted RBP11.2□□□□□ -0.62
ATG3-209ENST00000496423 PSMF1Q92530 271 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 ZNF653Q96CK0 615 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 TIGD1Q96MW7 591 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 TFB2MQ9H5Q4 396 aaKnown RBP11.2□□□□□ -0.62
ATG3-209ENST00000496423 RBM22Q9NW64 420 aaKnown RBP eCLIP11.2□□□□□ -0.62
ATG3-209ENST00000496423 ACTR10Q9NZ32 417 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 NOCTQ9UK39 431 aaKnown RBP11.2□□□□□ -0.62
ATG3-209ENST00000496423 SHOC2Q9UQ13 582 aa11.2□□□□□ -0.62
ATG3-209ENST00000496423 OR2AG2A6NM03 316 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 F8VZ95 297 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 H3BMH7 237 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 IFRD1O00458 451 aaPredicted RBP11.19□□□□□ -0.62
ATG3-209ENST00000496423 BTN3A3O00478 584 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 MATN3O15232 486 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 KLK8O60259 260 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 GFPT2O94808 682 aa11.19□□□□□ -0.62
ATG3-209ENST00000496423 MT-CYBP00156 380 aaPredicted RBP11.19□□□□□ -0.62
ATG3-209ENST00000496423 SLC4A1P02730 911 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms