RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 RNPEPL1Q9HAU8 725 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 PFDN4Q9NQP4 134 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 RIC8BQ9NVN3 520 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 PIKFYVEQ9Y2I7 2098 aa13.33□□□□□ -0.27
SPTBN1-205ENST00000496323 PRUNE2Q8WUY3 3088 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 SHISA7A6NL88 538 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 C9JVG2 144 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 H3BM21 787 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 CLDN9O95484 217 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 PAK4O96013 591 aaPredicted RBP13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 HOXB2P14652 356 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 MRPL19P49406 292 aaKnown RBP13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 MTTPP55157 894 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 ACTR3P61158 418 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 ERVK-8P63133 956 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 STX5Q13190 355 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 ART3Q13508 389 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 LRP8Q14114 963 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 STARD3Q14849 445 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 REP15Q6BDI9 236 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 DOK6Q6PKX4 331 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 C16orf89Q6UX73 402 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 FAM83HQ6ZRV2 1179 aaPredicted RBP13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 PGAM4Q8N0Y7 254 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 OR2L2Q8NH16 312 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 PKP4Q99569 1192 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC25A23Q9BV35 468 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 MRPL1Q9BYD6 325 aaKnown RBP13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 WDR41Q9HAD4 459 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC52A3Q9NQ40 469 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 KLQ9UEF7 1012 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 ZNHIT2Q9UHR6 403 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 PACSIN3Q9UKS6 424 aa13.33□□□□□ -0.28
SPTBN1-205ENST00000496323 KCNE1BA0A087WTH5 132 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 C17orf113A0A1B0GUU1 675 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 MANBAO00462 879 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 CHUKO15111 745 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 CIB2O75838 187 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 KRT36O76013 467 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 MAP4P27816 1152 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 ZFP36L2P47974 494 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 NFE2L1Q14494 772 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 INPP5AQ14642 412 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 IRF4Q15306 451 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 TRMT5Q32P41 509 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 PLA2G4EQ3MJ16 856 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 SDE2Q6IQ49 451 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 RNF165Q6ZSG1 346 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 RETREG3Q86VR2 466 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 MYLK4Q86YV6 388 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 ENDOVQ8N8Q3 282 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 FNDC5Q8NAU1 212 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 TP53I13Q8NBR0 393 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 GANCQ8TET4 914 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 KLK6Q92876 244 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 USP7Q93009 1102 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 CCDC138Q96M89 665 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 CDRT15Q96T59 188 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 TEX101Q9BY14 249 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 OSBPL6Q9BZF3 934 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 BRINP2Q9C0B6 783 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 ACTR8Q9H981 624 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 DNAJC11Q9NVH1 559 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 INTS7Q9NVH2 962 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 STOX2Q9P2F5 926 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 PABPN1LA6NDY0 278 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 MGAT4DA6NG13 374 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 NRP2O60462 931 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 ULK1O75385 1050 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 C1orf105O95561 183 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC16A8O95907 504 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 CATP04040 527 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 CAPN3P20807 821 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 DRD1P21728 446 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 CPSF6Q16630 551 aaKnown RBP eCLIP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 TMEM259Q4ZIN3 620 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 ATP6AP1LQ52LC2 224 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 RFTN2Q52LD8 501 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 C1orf146Q5VVC0 180 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 TRIM46Q7Z4K8 759 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 OR14C36Q8NHC7 312 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 CCDC124Q96CT7 223 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 C1QTNF2Q9BXJ5 285 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 TM7SF3Q9NS93 570 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC23A2Q9UGH3 650 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 PRPF19Q9UMS4 504 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 POMPQ9Y244 141 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 OR1A2Q9Y585 309 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 PCDHGA7Q9Y5G6 932 aa13.32□□□□□ -0.28
SPTBN1-205ENST00000496323 TICRRQ7Z2Z1 1910 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 PRR23AA6NEV1 266 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 H0Y3Z8 333 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 NR5A2O00482 541 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 CFLARO15519 480 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 DNTTP04053 509 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 ASGR2P07307 311 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 ACADLP28330 430 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 IMPA1P29218 277 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 TRIM23P36406 574 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms