RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 OTUB1Q96FW1 271 aaPredicted RBP3.52□□□□□ -1.85
CLK1-214ENST00000496205 ADGRG7Q96K78 797 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 INTS14Q96SY0 518 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 CPNE1Q99829 537 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 KLHL1Q9NR64 748 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 TCP11L1Q9NUJ3 509 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.52□□□□□ -1.85
CLK1-214ENST00000496205 IL17BQ9UHF5 180 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 KNSTRNQ9Y448 316 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 YIPF1Q9Y548 306 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.52□□□□□ -1.85
CLK1-214ENST00000496205 POMT1Q9Y6A1 747 aa3.52□□□□□ -1.85
CLK1-214ENST00000496205 ZFP37Q9Y6Q3 630 aaPredicted RBP3.52□□□□□ -1.85
CLK1-214ENST00000496205 CGNL1Q0VF96 1302 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 TRAV34A0A0B4J273 112 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 ASPDHA6ND91 283 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 OR6C76A6NM76 312 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 ERI2A8K979 691 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 FAM86B1E9PN63 330 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 CCDC188H7C350 402 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 GPR137BO60478 399 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 SYNCRIPO60506 623 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 LIPFP07098 398 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 RAB40ALP0C0E4 278 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 FAM86B2P0C5J1 330 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 FAM200BP0CF97 657 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 HSPA4P34932 840 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 ATP6V1E1P36543 226 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 CRKLP46109 303 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 AMPHP49418 695 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 THOP1P52888 689 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 UBASH3AP57075 661 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 SEC61A1P61619 476 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 POLR2LP62875 67 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 RBM39Q14498 530 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 NR1D2Q14995 579 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 TMEM35AQ53FP2 167 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 ZRANB3Q5FWF4 1079 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 ZNF704Q6ZNC4 412 aaPredicted RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 RAPH1Q70E73 1250 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 PIWIL4Q7Z3Z4 852 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 CCDC91Q7Z6B0 441 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 PTOV1Q86YD1 416 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.51□□□□□ -1.85
CLK1-214ENST00000496205 ZNF843Q8N446 348 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 KBTBD3Q8NAB2 608 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 EXD1Q8NHP7 514 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 OCC1Q8TAD7 63 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 FGFBP3Q8TAT2 258 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 WBP2Q969T9 261 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 LINGO1Q96FE5 620 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 LRRC3BQ96PB8 259 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 ZNF385AQ96PM9 386 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 NODALQ96S42 347 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 MGME1Q9BQP7 344 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 KATNB1Q9BVA0 655 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 WNT5BQ9H1J7 359 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 DDX31Q9H8H2 851 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 TRPV4Q9HBA0 871 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 ACKR4Q9NPB9 350 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 PIH1D3Q9NQM4 214 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 ABT1Q9ULW3 272 aaKnown RBP3.51□□□□□ -1.85
CLK1-214ENST00000496205 PADI2Q9Y2J8 665 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 MMP24Q9Y5R2 645 aa3.51□□□□□ -1.85
CLK1-214ENST00000496205 TAF1P21675 1872 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 A0A0G2JNG1 304 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 A0A1W2PPK0 400 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 HYKKA2RU49 373 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 ENO4A6NNW6 628 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 TULP2O00295 520 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 WDPCPO95876 746 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 LDLRP01130 860 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 NR1D1P20393 614 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 GNL1P36915 607 aaPredicted RBP3.5□□□□□ -1.85
CLK1-214ENST00000496205 PSMC4P43686 418 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 TAF6P49848 677 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 LIMK1P53667 647 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 RPL24P83731 157 aaKnown RBP3.5□□□□□ -1.85
CLK1-214ENST00000496205 DMPKQ09013 629 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 TUBB2AQ13885 445 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 KIR2DS5Q14953 304 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 KRT39Q6A163 491 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 TRNP1Q6NT89 227 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 FAM122CQ6P4D5 195 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 CREB3L2Q70SY1 520 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 DSG4Q86SJ6 1040 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 KMT5CQ86Y97 462 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 ARHGAP24Q8N264 748 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 ARL6IP6Q8N6S5 226 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 L3MBTL4Q8NA19 623 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 IQUBQ8NA54 791 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 MOSPD2Q8NHP6 518 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 SPATA20Q8TB22 786 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 LNX1Q8TBB1 728 aaPredicted RBP3.5□□□□□ -1.85
CLK1-214ENST00000496205 PPP4R1Q8TF05 950 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 SORCS1Q8WY21 1168 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 CORO2AQ92828 525 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 BICD1Q96G01 975 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 HES6Q96HZ4 224 aa3.5□□□□□ -1.85
CLK1-214ENST00000496205 CCDC43Q96MW1 224 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms