RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LPGAT1Q92604 370 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 WBP1Q96G27 269 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 NAT9Q9BTE0 207 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 SPRY4Q9C004 299 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 CCDC68Q9H2F9 335 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 ACTR10Q9NZ32 417 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 ICKQ9UPZ9 632 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 BTRCQ9Y297 605 aa17.11■□□□□ 0.33
HDAC4-211ENST00000494800 SLC9B1P1A6NJY1 282 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 KIAA0754O94854 1291 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 LIFP15018 202 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 PGAM1P18669 254 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 CHRM3P20309 590 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 ABRQ12979 859 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 SOWAHCQ53LP3 525 aaPredicted RBP17.1■□□□□ 0.33
HDAC4-211ENST00000494800 SPESP1Q6UW49 350 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 UNC5AQ6ZN44 842 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 ADGRF3Q8IZF5 1079 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
HDAC4-211ENST00000494800 LKAAEAR1Q8TD35 194 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 MAGEC3Q8TD91 643 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 FAM167BQ9BTA0 163 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 RAB11FIP5Q9BXF6 653 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 C20orf96Q9NUD7 363 aaPredicted RBP17.1■□□□□ 0.33
HDAC4-211ENST00000494800 CDYLQ9Y232 598 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 CRYL1Q9Y2S2 319 aa17.1■□□□□ 0.33
HDAC4-211ENST00000494800 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
HDAC4-211ENST00000494800 ZNF891A8MT65 544 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-211ENST00000494800 NDC80O14777 642 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 TTC4O95801 387 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 ITGB2P05107 769 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 CCNFP41002 786 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 PTGIRP43119 386 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 RAB28P51157 221 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 MC1RQ01726 317 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 SRSF6Q13247 344 aaKnown RBP17.09■□□□□ 0.33
HDAC4-211ENST00000494800 MORF4L2Q15014 288 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 CTSL3PQ5NE16 218 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 KIAA1614Q5VZ46 1190 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 TIPARPQ7Z3E1 657 aaKnown RBP17.09■□□□□ 0.33
HDAC4-211ENST00000494800 TMEM126BQ8IUX1 230 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 VRK3Q8IV63 474 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 PDIK1LQ8N165 341 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 GALNT6Q8NCL4 622 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-211ENST00000494800 SLC22A18Q96BI1 424 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 SIGLEC10Q96LC7 697 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 BIRC8Q96P09 236 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 PITPNM3Q9BZ71 974 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 KCND1Q9NSA2 647 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 SLC39A10Q9ULF5 831 aa17.09■□□□□ 0.33
HDAC4-211ENST00000494800 ZCWPW2A0A1B0GU75 182 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 ISM1B1AKI9 464 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 SCRG1O75711 98 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 CHRM5P08912 532 aaPredicted RBP17.08■□□□□ 0.32
HDAC4-211ENST00000494800 PKMP14618 531 aaKnown RBP17.08■□□□□ 0.32
HDAC4-211ENST00000494800 ZNF28P17035 718 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 ATP5DP30049 168 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 STAT5AP42229 794 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 KIR2DS3Q14952 304 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 GPR19Q15760 415 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 TTLL9Q3SXZ7 439 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 PWWP2BQ6NUJ5 590 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 CENPUQ71F23 418 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 SLC39A7Q92504 469 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 RAD51AP1Q96B01 352 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 ARHGAP9Q9BRR9 750 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 TRIM56Q9BRZ2 755 aaKnown RBP17.08■□□□□ 0.32
HDAC4-211ENST00000494800 LATS2Q9NRM7 1088 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 IL1RAPL1Q9NZN1 696 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 PADI1Q9ULC6 663 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 COMMD10Q9Y6G5 202 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 FAM169AQ9Y6X4 670 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 PTPRQQ9UMZ3 2332 aa17.08■□□□□ 0.32
HDAC4-211ENST00000494800 SDK2Q58EX2 2172 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 LOC101059948A0A1B0GTJ6 334 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 CPNE3O75131 537 aaKnown RBP17.07■□□□□ 0.32
HDAC4-211ENST00000494800 NIPSNAP2O75323 286 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 MSL3P1P0C860 447 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 ST6GAL1P15907 406 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 UGT2B7P16662 529 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 PKLRP30613 574 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 CASQ1P31415 396 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 DHX9Q08211 1270 aaKnown RBP17.07■□□□□ 0.32
HDAC4-211ENST00000494800 KYNUQ16719 465 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 SPANXN3Q5MJ09 141 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 FBXO38Q6PIJ6 1188 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 KCNMB4Q86W47 210 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 ZBTB2Q8N680 514 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 ZNF501Q96CX3 271 aaPredicted RBP17.07■□□□□ 0.32
HDAC4-211ENST00000494800 TCTN2Q96GX1 697 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 SLC45A3Q96JT2 553 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 PPM1MQ96MI6 270 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 TRAPPC9Q96Q05 1148 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 EBNA1BP2Q99848 306 aaKnown RBP17.07■□□□□ 0.32
HDAC4-211ENST00000494800 SERTAD3Q9UJW9 196 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 KCND3Q9UK17 655 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 PLAGL1Q9UM63 463 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 ZFYVE26Q68DK2 2539 aa17.07■□□□□ 0.32
HDAC4-211ENST00000494800 A0A0J9YY10 115 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms