RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CNTRLQ7Z7A1 2325 aa11.27□□□□□ -0.61
VTI1A-208ENST00000494728 KRT87PA6NCN2 255 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 ARGFXA6NJG6 315 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 IQCF5A8MTL0 148 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 MKRN2OSH3BPM6 223 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 MEN1O00255 615 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 MATN2O00339 956 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 ZNF189O75820 626 aaPredicted RBP11.26□□□□□ -0.61
VTI1A-208ENST00000494728 AP2A2O94973 939 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 RECKO95980 971 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 MSL3P1P0C860 447 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 MLLT10P55197 1068 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 CRADDP78560 199 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 TMTC4Q5T4D3 741 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 TSTD2Q5T7W7 516 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 SEL1L2Q5TEA6 688 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 IZUMO3Q5VZ72 239 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 TCTN3Q6NUS6 607 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 UNC5AQ6ZN44 842 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 ASB18Q6ZVZ8 466 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 SYVN1Q86TM6 617 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 C19orf47Q8N9M1 422 aaKnown RBP11.26□□□□□ -0.61
VTI1A-208ENST00000494728 DNAAF3Q8N9W5 541 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 LINC01555Q8NAE3 123 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 OR8K5Q8NH50 307 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 CPT1BQ92523 772 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 MIB2Q96AX9 1013 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 LRFN5Q96NI6 719 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 OR2A14Q96R47 310 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 GPR87Q9BY21 358 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 ACTR5Q9H9F9 607 aaPredicted RBP11.26□□□□□ -0.61
VTI1A-208ENST00000494728 VPS37BQ9H9H4 285 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 RAB6BQ9NRW1 208 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 GUCA1BQ9UMX6 200 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 FARSAQ9Y285 508 aaKnown RBP11.26□□□□□ -0.61
VTI1A-208ENST00000494728 ASF1AQ9Y294 204 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 TCAF1Q9Y4C2 921 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 ESPL1Q14674 2120 aa11.26□□□□□ -0.61
VTI1A-208ENST00000494728 CELSR2Q9HCU4 2923 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 HEATR9A2RTY3 570 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 CLEC18AA5D8T8 446 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 C2orf74A8MZ97 194 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 LIN7AO14910 233 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-208ENST00000494728 ZNF749O43361 778 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 CNOT3O75175 753 aaKnown RBP11.25□□□□□ -0.61
VTI1A-208ENST00000494728 CHRM5P08912 532 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-208ENST00000494728 CYP2A7P20853 494 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 CCR7P32248 378 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 ITGA1P56199 1179 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 KLRB1Q12918 225 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 GRB7Q14451 532 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 AFTPHQ6ULP2 937 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 CLEC18BQ6UXF7 455 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 PPP1R21Q6ZMI0 780 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 LINC00523Q86TU6 105 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 SPNS2Q8IVW8 549 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 KRT222Q8N1A0 295 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 CLEC18CQ8NCF0 446 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 OR5K2Q8NHB8 316 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 LRRC45Q96CN5 670 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 CLIP3Q96DZ5 547 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 RANBP9Q96S59 729 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 FANCEQ9HB96 536 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 TCFL5Q9UL49 500 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 KLHL20Q9Y2M5 609 aa11.25□□□□□ -0.61
VTI1A-208ENST00000494728 TDRKHQ9Y2W6 561 aaKnown RBP11.25□□□□□ -0.61
VTI1A-208ENST00000494728 LRBAP50851 2863 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 NOTCH2Q04721 2471 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 ERI2A8K979 691 aaKnown RBP11.24□□□□□ -0.61
VTI1A-208ENST00000494728 MASP2O00187 686 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 PSMD3O43242 534 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 FTH1P02794 183 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 APRTP07741 180 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 CBSLP0DN79 551 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 ARNTP27540 789 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 SHMT2P34897 504 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 RPL22P35268 128 aaKnown RBP11.24□□□□□ -0.61
VTI1A-208ENST00000494728 CBSP35520 551 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 FDFT1P37268 417 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 UQCRFS1P47985 274 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 GSDMDP57764 484 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 RPS15P62841 145 aaKnown RBP11.24□□□□□ -0.61
VTI1A-208ENST00000494728 ATP1A4Q13733 1029 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 NCF4Q15080 339 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 NADK2Q4G0N4 442 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 SYTL3Q4VX76 610 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 MEI1Q5TIA1 1274 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 C1orf189Q5VU69 101 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 TAX1BP1Q86VP1 789 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 TBC1D21Q8IYX1 336 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 SLC22A15Q8IZD6 547 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 RNF10Q8N5U6 811 aaKnown RBP11.24□□□□□ -0.61
VTI1A-208ENST00000494728 ZBTB2Q8N680 514 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 OR4L1Q8NH43 312 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 IL17FQ96PD4 163 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 AP1M1Q9BXS5 423 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 NLNQ9BYT8 704 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 SPRTNQ9H040 489 aaPredicted RBP11.24□□□□□ -0.61
VTI1A-208ENST00000494728 ING2Q9H160 280 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 MLXIPLQ9NP71 852 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms