RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 IGLV3-16A0A075B6K0 115 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 C17orf113A0A1B0GUU1 675 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 RCCD1A6NED2 376 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 OR51F1A6NGY5 319 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 OR2B3O76000 313 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 UGT2B7P16662 529 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 AGXTP21549 392 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 COL8A1P27658 744 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 CSE1LP55060 971 aaKnown RBP12.22□□□□□ -0.45
SKA1-205ENST00000494518 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
SKA1-205ENST00000494518 POU6F1Q14863 301 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 NR6A1Q15406 480 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 DBN1Q16643 649 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 ZNF385CQ66K41 422 aaPredicted RBP12.22□□□□□ -0.45
SKA1-205ENST00000494518 MRGPREQ86SM8 312 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 RAB43Q86YS6 212 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 FAM20CQ8IXL6 584 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 GPR135Q8IZ08 494 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 C19orf47Q8N9M1 422 aaKnown RBP12.22□□□□□ -0.45
SKA1-205ENST00000494518 TMEM102Q8N9M5 508 aaPredicted RBP12.22□□□□□ -0.45
SKA1-205ENST00000494518 HEXDCQ8WVB3 486 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 TFB2MQ9H5Q4 396 aaKnown RBP12.22□□□□□ -0.45
SKA1-205ENST00000494518 VPS37BQ9H9H4 285 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 SYTL2Q9HCH5 934 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 SPHK1Q9NYA1 384 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 DHCR7Q9UBM7 475 aaKnown RBP12.22□□□□□ -0.45
SKA1-205ENST00000494518 CDYLQ9Y232 598 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 PTRH2Q9Y3E5 179 aaKnown RBP12.22□□□□□ -0.45
SKA1-205ENST00000494518 POLEQ07864 2286 aa12.22□□□□□ -0.45
SKA1-205ENST00000494518 TRBV5-4A0A0C4DH59 114 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 C2orf72A6NCS6 295 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 METTL18O95568 372 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 CD151P48509 253 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 RRADP55042 308 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 COPS2P61201 443 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 SPA17Q15506 151 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 PLEKHN1Q494U1 663 aaPredicted RBP12.21□□□□□ -0.45
SKA1-205ENST00000494518 GPR33Q49SQ1 333 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 CCDC38Q502W7 563 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 ZNF449Q6P9G9 518 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 UNC5AQ6ZN44 842 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 ARHGEF18Q6ZSZ5 1173 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 MED25Q71SY5 747 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 CISD2Q8N5K1 135 aaKnown RBP12.21□□□□□ -0.45
SKA1-205ENST00000494518 ZNF655Q8N720 491 aaPredicted RBP12.21□□□□□ -0.45
SKA1-205ENST00000494518 LMNTD1Q8N9Z9 388 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 GLIS1Q8NBF1 620 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 ELMO1Q92556 727 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 PNPLA2Q96AD5 504 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 SLC29A3Q9BZD2 475 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 ASF1BQ9NVP2 202 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 NLE1Q9NVX2 485 aaPredicted RBP12.21□□□□□ -0.45
SKA1-205ENST00000494518 IMPACTQ9P2X3 320 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 CIDEBQ9UHD4 219 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 GPN3Q9UHW5 284 aaPredicted RBP12.21□□□□□ -0.45
SKA1-205ENST00000494518 ASF1AQ9Y294 204 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 PADI2Q9Y2J8 665 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 KLHL20Q9Y2M5 609 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 PCDHGB7Q9Y5F8 929 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 PCDHA3Q9Y5H8 950 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 DUSP10Q9Y6W6 482 aa12.21□□□□□ -0.45
SKA1-205ENST00000494518 LRBAP50851 2863 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 SOWAHDA6NJG2 315 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 CNOT3O75175 753 aaKnown RBP12.2□□□□□ -0.46
SKA1-205ENST00000494518 ALOX12BO75342 701 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 KLF7O75840 302 aaPredicted RBP12.2□□□□□ -0.46
SKA1-205ENST00000494518 CHRM5P08912 532 aaPredicted RBP12.2□□□□□ -0.46
SKA1-205ENST00000494518 HBQ1P09105 142 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 PEBP1P30086 187 aaKnown RBP12.2□□□□□ -0.46
SKA1-205ENST00000494518 FOLR3P41439 243 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 CACNG1Q06432 222 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 RPA4Q13156 261 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 SYTL3Q4VX76 610 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 TAX1BP1Q86VP1 789 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 C2orf73Q8N5S3 287 aaPredicted RBP12.2□□□□□ -0.46
SKA1-205ENST00000494518 FAM71DQ8N9W8 422 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 ALG3Q92685 438 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 SNRNP40Q96DI7 357 aaKnown RBP12.2□□□□□ -0.46
SKA1-205ENST00000494518 CDKN2AIPNLQ96HQ2 116 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 GBP5Q96PP8 586 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 OR2A14Q96R47 310 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 SMAD5Q99717 465 aaKnown RBP12.2□□□□□ -0.46
SKA1-205ENST00000494518 IFT80Q9P2H3 777 aaPredicted RBP12.2□□□□□ -0.46
SKA1-205ENST00000494518 NDOR1Q9UHB4 597 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 CROCCQ5TZA2 2017 aa12.2□□□□□ -0.46
SKA1-205ENST00000494518 A0A0J9YY10 115 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 ISM1B1AKI9 464 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 H3BMH7 237 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 ZSCAN9O15535 394 aaPredicted RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 PTMAP06454 111 aaKnown RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 TPBGLP0DKB5 382 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 MSNP26038 577 aaKnown RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 SHMT2P34897 504 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 PTPN7P35236 360 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 CYLC1P35663 651 aaPredicted RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 GABRA4P48169 554 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 GDF10P55107 478 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 RWDD2BP57060 319 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms