RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 FADS3Q9Y5Q0 445 aa10.4□□□□□ -0.74
CLCN6-208ENST00000494028 TRIOBPQ9H2D6 2365 aa10.4□□□□□ -0.74
CLCN6-208ENST00000494028 LAMA2P24043 3122 aaKnown RBP10.4□□□□□ -0.75
CLCN6-208ENST00000494028 PLXND1Q9Y4D7 1925 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 PRSS51A0A1B0GVH4 220 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 A0A1W2PP18 115 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 TBC1D3BA6NDS4 549 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 PABPN1LA6NDY0 278 aaKnown RBP10.39□□□□□ -0.75
CLCN6-208ENST00000494028 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 LOC730098B7Z3J9 87 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 SLC28A1O00337 649 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 CASQ2O14958 399 aaPredicted RBP10.39□□□□□ -0.75
CLCN6-208ENST00000494028 RGS14O43566 566 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 PRAMEF4O60810 478 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 MMP20O60882 483 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 EPHX1P07099 455 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 PSMC3P17980 439 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 ATP6V1B2P21281 511 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 ATP6V1C1P21283 382 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 JAK1P23458 1154 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 PEX2P28328 305 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 KCNK10P57789 538 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 DPTQ07507 201 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 TMEM115Q12893 351 aaPredicted RBP10.39□□□□□ -0.75
CLCN6-208ENST00000494028 ENPP2Q13822 863 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 CAPRIN1Q14444 709 aaKnown RBP10.39□□□□□ -0.75
CLCN6-208ENST00000494028 RPS6KA2Q15349 733 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 SMU1Q2TAY7 513 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 PTCHD3Q3KNS1 767 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 PRAMEF9Q5VWM5 478 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 PARM1Q6UWI2 310 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 TRIM46Q7Z4K8 759 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 NLRP8Q86W28 1048 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 GALNT13Q8IUC8 556 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 MMAAQ8IVH4 418 aaKnown RBP10.39□□□□□ -0.75
CLCN6-208ENST00000494028 L3MBTL4Q8NA19 623 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 ASZ1Q8WWH4 475 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 FGF14Q92915 247 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 FOXJ1Q92949 421 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 ERLEC1Q96DZ1 483 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 LRCH3Q96II8 777 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 P2RY13Q9BPV8 354 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 CCM2Q9BSQ5 444 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 ACPTQ9BZG2 426 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 ACTR8Q9H981 624 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 MRPL40Q9NQ50 206 aaKnown RBP10.39□□□□□ -0.75
CLCN6-208ENST00000494028 DYRK4Q9NR20 520 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 FARSBQ9NSD9 589 aaKnown RBP10.39□□□□□ -0.75
CLCN6-208ENST00000494028 DNAJC11Q9NVH1 559 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 CLEC1BQ9P126 229 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 STOX2Q9P2F5 926 aaPredicted RBP10.39□□□□□ -0.75
CLCN6-208ENST00000494028 GULP1Q9UBP9 304 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 RIMS3Q9UJD0 308 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 LEF1Q9UJU2 399 aaPredicted RBP10.39□□□□□ -0.75
CLCN6-208ENST00000494028 PSMD13Q9UNM6 376 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 LRRC42Q9Y546 428 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 STON1Q9Y6Q2 735 aa10.39□□□□□ -0.75
CLCN6-208ENST00000494028 CCDC154A6NI56 674 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 NPC1O15118 1278 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 LZTS3O60299 673 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 SLC22A3O75751 556 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 RSL1D1O76021 490 aaKnown RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 CLDN9O95484 217 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 BAG2O95816 211 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 CATP04040 527 aaKnown RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 APODP05090 189 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 G6PDP11413 515 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 TCN1P20061 433 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 ITPKAP23677 461 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 VARSP26640 1264 aaKnown RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 IMPA1P29218 277 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 GDI1P31150 447 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 MSX2P35548 267 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 GRIA2P42262 883 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 GPR1P46091 355 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 SOX9P48436 509 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 POLR2JP52435 117 aaKnown RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 ATXN3P54252 364 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-208ENST00000494028 PFN3P60673 137 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 HMGCS1Q01581 520 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 CNTN1Q12860 1018 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 NFYCQ13952 458 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 ADGRE1Q14246 886 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 TLR1Q15399 786 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 AP5B1Q2VPB7 878 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 ITPRIPL2Q3MIP1 535 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 CCSMST1Q4G0I0 132 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 C2orf27AQ580R0 203 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 PAGE3Q5JUK9 113 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 AGBL4Q5VU57 503 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 IL23RQ5VWK5 629 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 ZFP1Q6P2D0 407 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 TMEM220Q6QAJ8 160 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 IZUMO2Q6UXV1 221 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 CACUL1Q86Y37 369 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 TDHQ8IZJ6 230 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 PQLC1Q8N2U9 271 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 MINDY1Q8N5J2 469 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 AADATQ8N5Z0 425 aa10.38□□□□□ -0.75
CLCN6-208ENST00000494028 PPFIBP2Q8ND30 876 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms