RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PRAMEP78395 509 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 ACVR1Q04771 509 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 OASLQ15646 514 aaKnown RBP12.05□□□□□ -0.48
COL6A1-205ENST00000492851 IGFBP7Q16270 282 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 TSTD2Q5T7W7 516 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 TLDC1Q6P9B6 456 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 TTC23LQ6PF05 361 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 RAB43Q86YS6 212 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 SLC13A5Q86YT5 568 aaPredicted RBP12.05□□□□□ -0.48
COL6A1-205ENST00000492851 EFCAB3Q8N7B9 438 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 OR6P1Q8NGX9 317 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 PROKR1Q8TCW9 393 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 MAIP1Q8WWC4 291 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 HDAC10Q969S8 669 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 CARD6Q9BX69 1037 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 RAB6BQ9NRW1 208 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 GPN3Q9UHW5 284 aaPredicted RBP12.05□□□□□ -0.48
COL6A1-205ENST00000492851 ICKQ9UPZ9 632 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 ZKSCAN5Q9Y2L8 839 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 TDRKHQ9Y2W6 561 aaKnown RBP12.05□□□□□ -0.48
COL6A1-205ENST00000492851 ZNF106Q9H2Y7 1883 aaKnown RBP12.05□□□□□ -0.48
COL6A1-205ENST00000492851 SPTA1P02549 2419 aa12.05□□□□□ -0.48
COL6A1-205ENST00000492851 A0A0J9YY10 115 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 TCRBV7S2A1N4TA0A589 114 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 ARGFXA6NJG6 315 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 TTLL8A6PVC2 850 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 DPM1O60762 260 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 VPS4BO75351 444 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 APOA4P06727 396 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 CHRM5P08912 532 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-205ENST00000492851 PRSS56P0CW18 603 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 TTPAP49638 278 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 ABRQ12979 859 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 SSPNQ14714 243 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 NCF4Q15080 339 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 RPS6KA1Q15418 735 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 CCNG2Q16589 344 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 SLC5A12Q1EHB4 618 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 CCDC38Q502W7 563 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 ZNF789Q5FWF6 425 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 CDHR3Q6ZTQ4 885 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 C19orf47Q8N9M1 422 aaKnown RBP12.04□□□□□ -0.48
COL6A1-205ENST00000492851 PPHLN1Q8NEY8 458 aaKnown RBP12.04□□□□□ -0.48
COL6A1-205ENST00000492851 OR5AR1Q8NGP9 310 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 OR13J1Q8NGT2 312 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 GSDMBQ8TAX9 411 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 ADAMTS17Q8TE56 1095 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 MIB2Q96AX9 1013 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 NACC2Q96BF6 587 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 FER1L6-AS2Q96M78 137 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 OR2A14Q96R47 310 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 RUFY1Q96T51 708 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 DESI2Q9BSY9 194 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 AP1M1Q9BXS5 423 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 XKR8Q9H6D3 395 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 CASS4Q9NQ75 786 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 INTS7Q9NVH2 962 aaKnown RBP12.04□□□□□ -0.48
COL6A1-205ENST00000492851 PIH1D1Q9NWS0 290 aaKnown RBP12.04□□□□□ -0.48
COL6A1-205ENST00000492851 VPS4AQ9UN37 437 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 SRPK3Q9UPE1 567 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 DRG1Q9Y295 367 aaKnown RBP12.04□□□□□ -0.48
COL6A1-205ENST00000492851 PRSS21Q9Y6M0 314 aa12.04□□□□□ -0.48
COL6A1-205ENST00000492851 ISM1B1AKI9 464 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-205ENST00000492851 PEX12O00623 359 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 PFDN6O15212 129 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 CEACAM4O75871 244 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 FKBP9O95302 570 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 GOT2P00505 430 aaKnown RBP12.03□□□□□ -0.48
COL6A1-205ENST00000492851 APRTP07741 180 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 PIM1P11309 404 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-205ENST00000492851 UGT2B7P16662 529 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 NPY2RP49146 381 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 RAB28P51157 221 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 DCDP81605 110 aaKnown RBP12.03□□□□□ -0.48
COL6A1-205ENST00000492851 HSPA14Q0VDF9 509 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 IL10RAQ13651 578 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 BRD3Q15059 726 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 TMED2Q15363 201 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 PCID2Q5JVF3 399 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 PRAMEF17Q5VTA0 474 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 RHBDD2Q6NTF9 364 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 DRICH1Q6PGQ1 229 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-205ENST00000492851 UNC5DQ6UXZ4 953 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 LRRC6Q86X45 466 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 SLC22A15Q8IZD6 547 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 RAB42Q8N4Z0 105 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 FAM26EQ8N5C1 309 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 TAB3Q8N5C8 712 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-205ENST00000492851 GLIS1Q8NBF1 620 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 ATG4AQ8WYN0 398 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 COL26A1Q96A83 441 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 PANX3Q96QZ0 392 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 TRIM55Q9BYV6 548 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 HOMER3Q9NSC5 361 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 TXLNGQ9NUQ3 528 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 C5AR2Q9P296 337 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 NDOR1Q9UHB4 597 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 GUCA1BQ9UMX6 200 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 PLCL2Q9UPR0 1127 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms