RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 RHOXF2Q9BQY4 288 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ULBP3Q9BZM4 244 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 PHACTR1Q9C0D0 580 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 EPN3Q9H201 632 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ADNPQ9H2P0 1102 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ZNF768Q9H5H4 540 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 FAM96AQ9H5X1 160 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 PPANQ9NQ55 473 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 ZNF71Q9NQZ8 489 aaPredicted RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 CATSPERZQ9NTU4 200 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 C20orf96Q9NUD7 363 aaPredicted RBP10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 POT1Q9NUX5 634 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 CROTQ9UKG9 612 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 PSMD13Q9UNM6 376 aa10.75□□□□□ -0.69
TMEM39A-211ENST00000491685 OR2AG2A6NM03 316 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 KPNA5O15131 536 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 TOX3O15405 576 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 RASSF9O75901 435 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 KIAA0754O94854 1291 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 AP2A2O94973 939 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 GSTM1P09488 218 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 OR56A5P0C7T3 313 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 GP1BBP13224 206 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 AMD1P17707 334 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 NR1D1P20393 614 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 IDSP22304 550 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 ACRV1P26436 265 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 TNFRSF8P28908 595 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 HALP42357 657 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 MAGEA3P43357 314 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 CCR10P46092 362 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 GSTM4Q03013 218 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 MAP7Q14244 749 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 KCNAB1Q14722 419 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 SLMAPQ14BN4 828 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 KCTD19Q17RG1 926 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 TEX35Q5T0J7 233 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 GPRC6AQ5T6X5 926 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 RNF187Q5TA31 235 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 IRGCQ6NXR0 463 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 KLHL35Q6PF15 583 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 TMEM220Q6QAJ8 160 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 WASH2PQ6VEQ5 465 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 C3orf62Q6ZUJ4 267 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 DET1Q7L5Y6 550 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 SERPINA9Q86WD7 417 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 LRRC6Q86X45 466 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 ZBED8Q8IZ13 594 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 DDHD1Q8NEL9 900 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 OR13J1Q8NGT2 312 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 CDKL2Q92772 493 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 CXorf40BQ96DE9 158 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 ZNF778Q96MU6 729 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 RUFY1Q96T51 708 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 FAM167BQ9BTA0 163 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 CCDC68Q9H2F9 335 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 SAYSD1Q9NPB0 183 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 WASH6PQ9NQA3 447 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 TREX1Q9NSU2 369 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 SLC2A6Q9UGQ3 507 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 CFAP20Q9Y6A4 193 aaKnown RBP10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 RELNP78509 3460 aa10.74□□□□□ -0.69
TMEM39A-211ENST00000491685 USP9XQ93008 2570 aaPredicted RBP10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 PCSK5Q92824 1860 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 IGHV5-51A0A0C4DH38 117 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 TRBV5-4A0A0C4DH59 114 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 C17orf113A0A1B0GUU1 675 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 H3BMM5 538 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 K7EM74 188 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 CCL22O00626 93 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 SPAG6O75602 509 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 POP7O75817 140 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 PHBP35232 272 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 DLSTP36957 453 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 MAGEA4P43358 317 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 PLOD1Q02809 727 aaPredicted RBP10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 DMPKQ09013 629 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 RPE65Q16518 533 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 CACHD1Q5VU97 1274 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 CES3Q6UWW8 571 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 CYS1Q717R9 158 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 AMZ2Q86W34 360 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 CCDC25Q86WR0 208 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 ESX1Q8N693 406 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 LILRA3Q8N6C8 439 aaPredicted RBP10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 FBXO36Q8NEA4 188 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 FBXO25Q8TCJ0 367 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 KLHL6Q8WZ60 621 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 PANX3Q96QZ0 392 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 FMO2Q99518 471 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 NSMCE4AQ9NXX6 385 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 GRHL1Q9NZI5 618 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 FAM8A1Q9UBU6 413 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 DMGDHQ9UI17 866 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 TEX264Q9Y6I9 313 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 MYO9AB2RTY4 2548 aa10.73□□□□□ -0.69
TMEM39A-211ENST00000491685 UNC79Q9P2D8 2635 aa10.72□□□□□ -0.69
TMEM39A-211ENST00000491685 UTP20O75691 2785 aaKnown RBP10.72□□□□□ -0.69
TMEM39A-211ENST00000491685 PIKFYVEQ9Y2I7 2098 aa10.72□□□□□ -0.69
TMEM39A-211ENST00000491685 E7ESA3 106 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms