RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SHISA6Q6ZSJ9 500 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 SLC13A5Q86YT5 568 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-211ENST00000491581 SYTL1Q8IYJ3 562 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 DNAAF3Q8N9W5 541 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 LINC01555Q8NAE3 123 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 FDCSPQ8NFU4 85 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 STYXQ8WUJ0 223 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 MIB2Q96AX9 1013 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 ULK4Q96C45 1275 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 FCRL4Q96PJ5 515 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 PITPNM3Q9BZ71 974 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 LRRC40Q9H9A6 602 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 ACTR5Q9H9F9 607 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-211ENST00000491581 ZBTB20Q9HC78 741 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-211ENST00000491581 CHRAC1Q9NRG0 131 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 RAB6BQ9NRW1 208 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 TUBD1Q9UJT1 453 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 ASF1AQ9Y294 204 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 NFS1Q9Y697 457 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 COLEC10Q9Y6Z7 277 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 C17orf113A0A1B0GUU1 675 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 AVILO75366 819 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 IPO7O95373 1038 aaKnown RBP8.6□□□□□ -1.03
HDAC3-211ENST00000491581 CHRM5P08912 532 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-211ENST00000491581 CYP2A7P20853 494 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 BDKRB1P46663 353 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 SNRPNP63162 240 aaKnown RBP8.6□□□□□ -1.03
HDAC3-211ENST00000491581 MC1RQ01726 317 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 HSPA14Q0VDF9 509 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 PRKAA1Q13131 559 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 GPR33Q49SQ1 333 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 MLIPQ5VWP3 458 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 KLHL35Q6PF15 583 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 SPESP1Q6UW49 350 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 PPP1R21Q6ZMI0 780 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 MPP5Q8N3R9 675 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 ZNF655Q8N720 491 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-211ENST00000491581 UBL4BQ8N7F7 174 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 C19orf47Q8N9M1 422 aaKnown RBP8.6□□□□□ -1.03
HDAC3-211ENST00000491581 Q8NA96 180 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 OR6P1Q8NGX9 317 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 COL26A1Q96A83 441 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 C19orf60Q96EN9 201 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 CD180Q99467 661 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 MENTQ9BUN1 341 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 EFHD1Q9BUP0 239 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 ING2Q9H160 280 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 TFB2MQ9H5Q4 396 aaKnown RBP8.6□□□□□ -1.03
HDAC3-211ENST00000491581 LUC7LQ9NQ29 371 aaKnown RBP8.6□□□□□ -1.03
HDAC3-211ENST00000491581 LZTFL1Q9NQ48 299 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 CASS4Q9NQ75 786 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 C1GALT1Q9NS00 363 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 SLC22A11Q9NSA0 550 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 TCFL5Q9UL49 500 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 TTC7AQ9ULT0 858 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-211ENST00000491581 SNX7Q9UNH6 387 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 ZNF148Q9UQR1 794 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 CSAG2Q9Y5P2 127 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 SHANK1Q9Y566 2161 aa8.6□□□□□ -1.03
HDAC3-211ENST00000491581 BLACEA4D250 179 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 GOLGA6L9A6NEM1 432 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 C2orf74A8MZ97 194 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 ISM1B1AKI9 464 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 C21orf140B9A014 251 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 CFAP99D6REC4 459 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 MKRN2OSH3BPM6 223 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 IFRD1O00458 451 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-211ENST00000491581 FFAR3O14843 346 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 GPR42O15529 346 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 KLF7O75840 302 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-211ENST00000491581 TMEM63AO94886 807 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 APRTP07741 180 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 MAGP20916 626 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 PSMA3P25788 255 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 MGAT1P26572 445 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 ARNTP27540 789 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 NDUFS1P28331 727 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 VPS41P49754 854 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 RPS15P62841 145 aaKnown RBP8.59□□□□□ -1.03
HDAC3-211ENST00000491581 SRSF11Q05519 484 aaKnown RBP8.59□□□□□ -1.03
HDAC3-211ENST00000491581 KLRB1Q12918 225 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 MRPL49Q13405 166 aaKnown RBP8.59□□□□□ -1.03
HDAC3-211ENST00000491581 SYTL3Q4VX76 610 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 CRTC2Q53ET0 693 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-211ENST00000491581 TMTC4Q5T4D3 741 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 IZUMO3Q5VZ72 239 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 TCTN3Q6NUS6 607 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 SYVN1Q86TM6 617 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 KMT5CQ86Y97 462 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 TEX19Q8NA77 164 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 CPT1BQ92523 772 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 SLC25A23Q9BV35 468 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 ACSS2Q9NR19 701 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 SYBUQ9NX95 663 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 ANAPC2Q9UJX6 822 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 TCAF1Q9Y4C2 921 aa8.59□□□□□ -1.03
HDAC3-211ENST00000491581 UTP20O75691 2785 aaKnown RBP8.59□□□□□ -1.03
HDAC3-211ENST00000491581 TLN1Q9Y490 2541 aaKnown RBP8.58□□□□□ -1.04
HDAC3-211ENST00000491581 CLEC18AA5D8T8 446 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 TTLL8A6PVC2 850 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms